# Energy minimization gives broken resides

**URL:** <https://gromacs.bioexcel.eu/t/energy-minimization-gives-broken-resides/6305>\
**Category:** User discussions\
**Tags:** mdp-parameters, mdrun\
**Created:** [April 29, 2023, 8:54pm UTC](https://gromacs.bioexcel.eu/t/energy-minimization-gives-broken-resides/6305 "2023-04-29T20:54:32Z")\
**Posts on this page:** 1\
**Showing post:** 2

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**Author:** ![Karis](https://avatars.discourse-cdn.com/v4/letter/k/ed8c4c/32.png) [@Karis](https://gromacs.bioexcel.eu/u/Karis)\
**Post date:** [April 30, 2023, 9:40am UTC](https://gromacs.bioexcel.eu/t/energy-minimization-gives-broken-resides/6305/2 "2023-04-30T09:40:31Z")

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Not seeing the bond in the visualization software doesn’t necessarily mean it’s missing, sometimes the software just isn’t able to visualize it. [Bond Dissappearing in VMD](https://gromacs.bioexcel.eu/t/bond-dissappearing-in-vmd/6009)

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