# Error problem

**URL:** <https://gromacs.bioexcel.eu/t/error-problem/13153>\
**Category:** User discussions\
**Created:** [January 28, 2026, 7:27pm UTC](https://gromacs.bioexcel.eu/t/error-problem/13153 "2026-01-28T19:27:08Z")\
**Posts on this page:** 2\
**Page:** 1

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**Author:** ![mondalritam](https://avatars.discourse-cdn.com/v4/letter/m/b77776/32.png) [@mondalritam](https://gromacs.bioexcel.eu/u/mondalritam)\
**Post date:** [January 28, 2026, 7:27pm UTC](https://gromacs.bioexcel.eu/t/error-problem/13153/1 "2026-01-28T19:27:08Z")

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GROMACS version:  
GROMACS modification: Yes/No  
Here post your question  
gmx grompp -f em.mdp -c solv\_ions.gro -p topol.top -o em.tpr  
:-) GROMACS - gmx grompp, 2026.0 (-:

Executable: /usr/local/gromacs/bin/gmx  
Data prefix: /usr/local/gromacs  
Working dir: /mnt/d/vchemistry3  
Command line:  
gmx grompp -f em.mdp -c solv\_ions.gro -p topol.top -o em.tpr

Ignoring obsolete mdp entry ‘ns\_type’  
Setting the LD random seed to -1348135077

Generated 22578 of the 22578 non-bonded parameter combinations  
Generating 1-4 interactions: fudge = 1

Generated 19452 of the 22578 1-4 parameter combinations

Excluding 3 bonded neighbours molecule type ‘Protein\_chain\_A’

Excluding 3 bonded neighbours molecule type ‘LIG’

Excluding 2 bonded neighbours molecule type ‘SOL’

Excluding 1 bonded neighbours molecule type ‘NA’  
Analysing residue names:  
There are: 901 Protein residues  
There are: 1 Other residues  
There are: 80727 Water residues  
There are: 6 Ion residues  
Analysing Protein…  
Analysing residues not classified as Protein/DNA/RNA/Water and splitting into groups…  
Number of degrees of freedom in T-Coupling group rest is 526845.00  
The integrator does not provide a ensemble temperature, there is no system ensemble temperature

The largest distance between excluded atoms is 3.571 nm between atom 5498 and 5517

WARNING 1 [file em.mdp]:  
The largest distance between excluded atoms is 3.571 nm between atom 5498  
and 5517, which is larger than the cut-off distance. This will lead to  
missing long-range corrections in the forces and energies. If you expect  
that minimization will bring such distances within the cut-off, you can  
ignore this warning.

Calculating fourier grid dimensions for X Y Z  
Using a fourier grid of 144x144x144, spacing 0.107 0.107 0.107

Estimate for the relative computational load of the PME mesh part: 0.24

This run will generate roughly 20 Mb of data

There was 1 WARNING

* * *

Program: gmx grompp, version 2026.0  
Source file: src/gromacs/gmxpreprocess/grompp.cpp (line 2917)

Fatal error:  
Too many warnings (1).  
If you are sure all warnings are harmless, use the -maxwarn option.

mondalritam@LAPTOP-CE3QKKL9:/mnt/d/vchemistry3$ gmx grompp -f em.mdp -c solv\_ions.gro -p topol.top -o em.tpr -maxwarm  
:-) GROMACS - gmx grompp, 2026.0 (-:

Executable: /usr/local/gromacs/bin/gmx  
Data prefix: /usr/local/gromacs  
Working dir: /mnt/d/vchemistry3  
Command line:  
gmx grompp -f em.mdp -c solv\_ions.gro -p topol.top -o em.tpr -maxwarm

* * *

Program: gmx grompp, version 2026.0  
Source file: src/gromacs/commandline/cmdlineparser.cpp (line 271)  
Function: void gmx::CommandLineParser::parse(int\*, char\*\*)

Error in user input:  
Invalid command-line options  
Unknown command-line option -maxwarm

For more information and tips for troubleshooting, please check the GROMACS  
website at [Common errors when using GROMACS - GROMACS 2026.0 documentation](https://manual.gromacs.org/current/user-guide/run-time-errors.html)

give me exact command line for the solution of the problem

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**Author:** ![lmullender](https://avatars.discourse-cdn.com/v4/letter/l/8dc957/32.png) [@lmullender](https://gromacs.bioexcel.eu/u/lmullender)\
**Post date:** [January 29, 2026, 12:05pm UTC](https://gromacs.bioexcel.eu/t/error-problem/13153/2 "2026-01-29T12:05:20Z")

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You’re not talking to an LLM here, this is a forum with real people taking their time to answer questions. “give me exact solution” is not a very nice way to ask for help. For what it’s worth though, there’s a typo in “-maxwarm”, should be “-maxwarn 1”, you have to specify a number.
