# Jumping residue after PBC removal

**URL:** https://gromacs.bioexcel.eu/t/jumping-residue-after-pbc-removal/9818
**Category:** User discussions
**Tags:** pbc, gmx-trjconv
**Created:** [August 5, 2024, 11:46am UTC](https://gromacs.bioexcel.eu/t/jumping-residue-after-pbc-removal/9818 "2024-08-05T11:46:04Z")
**Posts on this page:** 1
**Showing post:** 11

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### Author: ![Karis](https://avatars.discourse-cdn.com/v4/letter/k/ed8c4c/32.png) [@Karis](https://gromacs.bioexcel.eu/u/Karis)
#### Post date: [August 8, 2024, 1:53pm UTC](https://gromacs.bioexcel.eu/t/jumping-residue-after-pbc-removal/9818/11 "2024-08-08T13:53:07Z")

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Is this the [post](https://gromacs.bioexcel.eu/t/issues-when-using-fit-rot-trans/9323/5) you were referring to? They used -pbc whole in the place of -pbc nojump, does that still cause the same issues?

Also, found this [page](https://manual.gromacs.org/current/user-guide/terminology.html#suggested-workflow) in the manual which should be helpful if there are still further issues

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