# LINCS algorithm warning dueing NVT run

**URL:** <https://gromacs.bioexcel.eu/t/lincs-algorithm-warning-dueing-nvt-run/5529>\
**Category:** User discussions\
**Tags:** pdb2gmx, forcefield, mdp-parameters, mdrun\
**Created:** [January 5, 2023, 5:43am UTC](https://gromacs.bioexcel.eu/t/lincs-algorithm-warning-dueing-nvt-run/5529 "2023-01-05T05:43:12Z")\
**Posts on this page:** 1\
**Page:** 1

<div class="post-metadata">

**Author:** ![bhanu](https://avatars.discourse-cdn.com/v4/letter/b/eb9ed0/32.png) [@bhanu](https://gromacs.bioexcel.eu/u/bhanu)\
**Post date:** [January 5, 2023, 5:43am UTC](https://gromacs.bioexcel.eu/t/lincs-algorithm-warning-dueing-nvt-run/5529/1 "2023-01-05T05:43:12Z")

</div>

GROMACS version: 2020  
GROMACS modification: Yes/No  
Here post your question : I am performing MD simulations for a protein-ligand complex. During NVT run LINCS algorithm gives an error. I have attached the error below.  
" Step 10, time 0.02 (ps) LINCS WARNING  
relative constraint deviation after LINCS:  
rms 104.156593, max 2735.969971 (between atoms 3316 and 3317)  
bonds that rotated more than 30 degrees:  
atom 1 atom 2 angle previous, current, constraint length  
3316 3317 135.7 0.1000 273.6970 0.1000  
Wrote pdb files with previous and current coordinates  
"

Please suggest me how to resolve this.
