# Make check error of Pdb2gmx3Test

**URL:** <https://gromacs.bioexcel.eu/t/make-check-error-of-pdb2gmx3test/10911>\
**Category:** User discussions\
**Tags:** make-error\
**Created:** [December 28, 2024, 2:00am UTC](https://gromacs.bioexcel.eu/t/make-check-error-of-pdb2gmx3test/10911 "2024-12-28T02:00:58Z")\
**Posts on this page:** 1\
**Page:** 1

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**Author:** ![sizhe\_Li](https://avatars.discourse-cdn.com/v4/letter/s/3da27b/32.png) [@sizhe\_Li](https://gromacs.bioexcel.eu/u/sizhe_Li)\
**Post date:** [December 28, 2024, 2:00am UTC](https://gromacs.bioexcel.eu/t/make-check-error-of-pdb2gmx3test/10911/1 "2024-12-28T02:00:58Z")

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GROMACS version:2024.4  
cmake:3.22  
gcc / g++:11.4  
cuda:11.7  
GROMACS modification: Yes/No  
Here post your question  
I got the ‘52 - Pdb2gmx3Test (Failed)’ when i run the make check, and here are my commands:  
’  
mkdir build  
cd build  
cmake … -DGMX\_BUILD\_OWN\_FFTW=ON -DREGRESSIONTEST\_DOWNLOAD=ON -DGMX\_EXTERNAL\_BLAS=OFF -DGMX\_EXTERNAL\_LAPACK=OFF -DGMX\_GPU=CUDA -DCMAKE\_INSTALL\_PREFIX=/home/zcma02/gromacs-2024-4 -DCUDA\_TOOLKIT\_ROOT\_DIR=/usr/local/cuda-11.7 -DCMAKE\_CUDA\_COMPILER=/usr/local/cuda-11.7/bin/nvcc -DCMAKE\_C\_COMPILER=/usr/bin/gcc -DCMAKE\_CXX\_COMPILER=/usr/bin/g++  
make  
make check  
’

 ![image](https://europe1.discourse-cdn.com/flex017/uploads/bioexcel1/original/2X/0/0ad31d2d7bbf79db1825778e4d0b1474fc0b52d8.png)  
 ![image](https://europe1.discourse-cdn.com/flex017/uploads/bioexcel1/original/2X/8/845af6b8e20d70a3de804a8bed78b7897b9bd745.png)  
 ![image](https://europe1.discourse-cdn.com/flex017/uploads/bioexcel1/original/2X/d/daa1c4b39ff836b275a46a4ba785af8a4e0b715f.png)  
 ![image](https://europe1.discourse-cdn.com/flex017/uploads/bioexcel1/original/2X/d/dad02f167f2465d21e9fc346c9b2ce8b65501721.png)  
 ![image](https://europe1.discourse-cdn.com/flex017/uploads/bioexcel1/original/2X/d/d27fb8893cebff9517430db8895b051c8ace762c.png)
