# \#gmx-tutorials **URL:** https://gromacs.bioexcel.eu/tag/gmx-tutorials/63.md [Latest](https://gromacs.bioexcel.eu/latest.md) · [Categories](https://gromacs.bioexcel.eu/categories.md) · [Tags](https://gromacs.bioexcel.eu/tags.md) --- ## [Accelerated Weight Histogram Method: from Principles to Practice](https://gromacs.bioexcel.eu/t/accelerated-weight-histogram-method-from-principles-to-practice/13206)
**Author:** [@avilla](https://gromacs.bioexcel.eu/u/avilla)\ **Replies:** 0\ **Last updated:** [February 10, 2026, 10:07am UTC](https://gromacs.bioexcel.eu/t/accelerated-weight-histogram-method-from-principles-to-practice/13206 "2026-02-10T10:07:04Z")
Webinar and Tutorial on Accelerated Weight Histogram Method (AWH) Two new tutorials on how to use AWH within the molecular dynamics engine, GROMACS. In the first tutorial, AWH Basic Potential of Mean Force and Converge… --- ## [Density-fit tutorial](https://gromacs.bioexcel.eu/t/density-fit-tutorial/11786)
**Author:** [@avilla](https://gromacs.bioexcel.eu/u/avilla)\ **Replies:** 0\ **Last updated:** [March 21, 2025, 5:32pm UTC](https://gromacs.bioexcel.eu/t/density-fit-tutorial/11786 "2025-03-21T17:32:57Z")
Hi, We are delighted to announce the release of a new GROMACS tutorial: ‘density-fit simulation’ To see more GROMACS tutorials go to: https://tutorials.gromacs.org. We welcome any questions and feedback. Kindly use ‘g… --- ## [Gromacs tutorial for covalently bound protein-ligand complex?](https://gromacs.bioexcel.eu/t/gromacs-tutorial-for-covalently-bound-protein-ligand-complex/11498)
**Author:** [@ganesh7shahane](https://gromacs.bioexcel.eu/u/ganesh7shahane)\ **Replies:** 0\ **Last updated:** [February 9, 2025, 10:15pm UTC](https://gromacs.bioexcel.eu/t/gromacs-tutorial-for-covalently-bound-protein-ligand-complex/11498 "2025-02-09T22:15:38Z")
Hi gromacs community, Does anyone know of any tutorials for covalently bound protein-ligand simulations? I feel setting up such simulations in gromacs is quite non-intuitive and I am surprised to see that there isn’t en… --- ## [Problem with Introduction to Molecular Dynamics tutorial](https://gromacs.bioexcel.eu/t/problem-with-introduction-to-molecular-dynamics-tutorial/10960)
**Author:** [@jlevine](https://gromacs.bioexcel.eu/u/jlevine)\ **Replies:** 4\ **Last updated:** [January 11, 2025, 9:10pm UTC](https://gromacs.bioexcel.eu/t/problem-with-introduction-to-molecular-dynamics-tutorial/10960 "2025-01-11T21:10:51Z")
I am new to MD and to Jupyter, so started at square one with the Intro to MD tutorial. Everything went fine until the step for assembling the .tpr file. I got the following error message: Fatal error: number of coordin… --- ## [Error running the notebook gromacs/online-tutorials/membrane-protein/main](https://gromacs.bioexcel.eu/t/error-running-the-notebook-gromacs-online-tutorials-membrane-protein-main/6999)
**Author:** [@asimbepari](https://gromacs.bioexcel.eu/u/asimbepari)\ **Replies:** 1\ **Last updated:** [August 9, 2023, 12:37pm UTC](https://gromacs.bioexcel.eu/t/error-running-the-notebook-gromacs-online-tutorials-membrane-protein-main/6999 "2023-08-09T12:37:08Z")
GROMACS version: GROMACS modification: Yes/No Here post your question Error loading notebook Unreadable Notebook: /home/jovyan/tutorial.ipynb NotJSONError(‘Notebook does not appear to be JSON: '{\\n “cells”: \[\\n {\\n “c… --- ## [New GROMACS tutorials](https://gromacs.bioexcel.eu/t/new-gromacs-tutorials/6913)
**Author:** [@FarzaneJP](https://gromacs.bioexcel.eu/u/FarzaneJP)\ **Replies:** 0\ **Last updated:** [July 28, 2023, 11:00am UTC](https://gromacs.bioexcel.eu/t/new-gromacs-tutorials/6913 "2023-07-28T11:00:28Z")
Hi GROMACS users, We are delighted to announce the release of two new GROMACS tutorials: ‘Free energy of solvation using AWH method’ and ‘membrane protein simulation’. Access all tutorials now through our website link:…