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[ 79%] Built target utility-test [ 79%] Building NVCC (Device) object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/mdlib-test_generated_settletestrunners.cu.o [ 79%] Building NVCC (Device) object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/mdlib-test_generated_constrtestrunners.cu.o Scanning dependencies of target mdlib-test make[3]: Warning: File 'src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/depend.make' has modification time 2.1 s in the future [ 79%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/calc_verletbuf.cpp.o [ 79%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constr.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestdata.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/constrtestrunners.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/ebin.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energydrifttracker.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/energyoutput.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/expanded.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/freeenergyparameters.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrog.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestdata.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settle.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestdata.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/settletestrunners.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/shake.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/simulationsignal.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroups.cpp.o [ 80%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/updategroupscog.cpp.o [ 81%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/leapfrogtestrunners_gpu.cpp.o [ 81%] Building CXX object src/gromacs/mdlib/tests/CMakeFiles/mdlib-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 81%] Linking CXX executable ../../../../bin/mdlib-test make[3]: warning: Clock skew detected. 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[ 82%] Built target awh-test Scanning dependencies of target density_fitting_applied_forces-test make[3]: Warning: File 'src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/depend.make' has modification time 2.4 s in the future [ 82%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfitting.cpp.o [ 82%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingamplitudelookup.cpp.o [ 82%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingforceprovider.cpp.o [ 82%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/densityfittingoptions.cpp.o [ 82%] Building CXX object src/gromacs/applied_forces/densityfitting/tests/CMakeFiles/density_fitting_applied_forces-test.dir/__/__/__/__/testutils/unittest_main.cpp.o [ 82%] Linking CXX executable ../../../../../bin/density_fitting_applied_forces-test make[3]: warning: Clock skew detected. 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[ 82%] Built target applied_forces-test Scanning dependencies of target listed_forces-test make[3]: Warning: File 'src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/depend.make' has modification time 2.5 s in the future [ 82%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/bonded.cpp.o [ 82%] Building CXX object src/gromacs/listed_forces/tests/CMakeFiles/listed_forces-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 82%] Linking CXX executable ../../../../bin/listed_forces-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 82%] Built target listed_forces-test Scanning dependencies of target onlinehelp-test-shared make[3]: Warning: File 'src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/depend.make' has modification time 2.6 s in the future [ 82%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test-shared.dir/mock_helptopic.cpp.o [ 82%] Linking CXX static library ../../../../lib/libonlinehelp-test-shared.a make[3]: warning: Clock skew detected. Your build may be incomplete. [ 82%] Built target onlinehelp-test-shared Scanning dependencies of target commandline-test make[3]: Warning: File 'src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/depend.make' has modification time 2.4 s in the future [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpmodule.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinehelpwriter.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanager.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlinemodulemanagertest.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineparser.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/cmdlineprogramcontext.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/filenm.cpp.o [ 82%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/pargs.cpp.o [ 83%] Building CXX object src/gromacs/commandline/tests/CMakeFiles/commandline-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 83%] Linking CXX executable ../../../../bin/commandline-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 83%] Built target commandline-test Scanning dependencies of target domdec-mpi-test make[3]: Warning: File 'src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/depend.make' has modification time 2.4 s in the future [ 83%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/haloexchange_mpi.cpp.o [ 83%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 83%] Linking CXX executable ../../../../bin/domdec-mpi-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 83%] Built target domdec-mpi-test Scanning dependencies of target domdec-test make[3]: Warning: File 'src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/depend.make' has modification time 2.5 s in the future [ 83%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/hashedmap.cpp.o [ 83%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/localatomsetmanager.cpp.o [ 83%] Building CXX object src/gromacs/domdec/tests/CMakeFiles/domdec-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 83%] Linking CXX executable ../../../../bin/domdec-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 83%] Built target domdec-test Scanning dependencies of target ewald-test make[3]: Warning: File 'src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/depend.make' has modification time 2.4 s in the future [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmebsplinetest.cpp.o [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmegathertest.cpp.o [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesolvetest.cpp.o [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmesplinespreadtest.cpp.o [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/pmetestcommon.cpp.o [ 84%] Building CXX object src/gromacs/ewald/tests/CMakeFiles/ewald-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 84%] Linking CXX executable ../../../../bin/ewald-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 84%] Built target ewald-test Scanning dependencies of target fft-test make[3]: Warning: File 'src/gromacs/fft/tests/CMakeFiles/fft-test.dir/depend.make' has modification time 2.6 s in the future [ 84%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/fft.cpp.o [ 84%] Building CXX object src/gromacs/fft/tests/CMakeFiles/fft-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 84%] Linking CXX executable ../../../../bin/fft-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 84%] Built target fft-test [ 84%] Building NVCC (Device) object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpu_utils-test_generated_typecasts_runner.cu.o [ 85%] Building NVCC (Device) object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/gpu_utils-test_generated_devicetransfers.cu.o Scanning dependencies of target gpu_utils-test make[3]: Warning: File 'src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/depend.make' has modification time 2.3 s in the future [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/clfftinitializer.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_availability.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_stream_manager.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/hostallocator.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/pinnedmemorychecker.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/device_buffer.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/typecasts.cpp.o [ 85%] Building CXX object src/gromacs/gpu_utils/tests/CMakeFiles/gpu_utils-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 85%] Linking CXX executable ../../../../bin/gpu_utils-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 85%] Built target gpu_utils-test Scanning dependencies of target hardware-test make[3]: Warning: File 'src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/depend.make' has modification time 2.5 s in the future [ 85%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/cpuinfo.cpp.o [ 85%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/hardwaretopology.cpp.o [ 86%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/device_management.cpp.o [ 86%] Building CXX object src/gromacs/hardware/tests/CMakeFiles/hardware-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 86%] Linking CXX executable ../../../../bin/hardware-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 86%] Built target hardware-test Scanning dependencies of target math-test make[3]: Warning: File 'src/gromacs/math/tests/CMakeFiles/math-test.dir/depend.make' has modification time 2.4 s in the future [ 86%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/arrayrefwithpadding.cpp.o [ 86%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/coordinatetransformation.cpp.o [ 86%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfit.cpp.o [ 86%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/dofit.cpp.o [ 86%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/exponentialmovingaverage.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/functions.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/gausstransform.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/densityfittingforce.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/invertmatrix.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/matrix.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/multidimarray.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/neldermead.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/optimization.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/paddedvector.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/vectypes.cpp.o [ 87%] Building CXX object src/gromacs/math/tests/CMakeFiles/math-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 87%] Linking CXX executable ../../../../bin/math-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 87%] Built target math-test Scanning dependencies of target mdrunutility-test-shared make[3]: Warning: File 'src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/depend.make' has modification time 2.5 s in the future [ 87%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test-shared.dir/threadaffinitytest.cpp.o [ 87%] Linking CXX static library ../../../../lib/libmdrunutility-test-shared.a make[3]: warning: Clock skew detected. Your build may be incomplete. [ 87%] Built target mdrunutility-test-shared Scanning dependencies of target mdrunutility-mpi-test make[3]: Warning: File 'src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/depend.make' has modification time 2.5 s in the future [ 87%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/threadaffinity_mpi.cpp.o [ 87%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 87%] Linking CXX executable ../../../../bin/mdrunutility-mpi-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 87%] Built target mdrunutility-mpi-test Scanning dependencies of target mdrunutility-test make[3]: Warning: File 'src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/depend.make' has modification time 2.5 s in the future [ 87%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/threadaffinity.cpp.o [ 87%] Building CXX object src/gromacs/mdrunutility/tests/CMakeFiles/mdrunutility-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 87%] Linking CXX executable ../../../../bin/mdrunutility-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 87%] Built target mdrunutility-test Scanning dependencies of target mdspan-test make[3]: Warning: File 'src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/depend.make' has modification time 2.5 s in the future [ 87%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/accessor_policy.cpp.o [ 87%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extents.cpp.o [ 87%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/extensions.cpp.o [ 87%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/layouts.cpp.o [ 88%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/mdspan.cpp.o [ 88%] Building CXX object src/gromacs/mdspan/tests/CMakeFiles/mdspan-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 88%] Linking CXX executable ../../../../bin/mdspan-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 88%] Built target mdspan-test Scanning dependencies of target mdtypes-test make[3]: Warning: File 'src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/depend.make' has modification time 2.5 s in the future [ 88%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/checkpointdata.cpp.o [ 88%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/forcebuffers.cpp.o [ 88%] Building CXX object src/gromacs/mdtypes/tests/CMakeFiles/mdtypes-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 88%] Linking CXX executable ../../../../bin/mdtypes-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 88%] Built target mdtypes-test Scanning dependencies of target onlinehelp-test make[3]: Warning: File 'src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/depend.make' has modification time 2.5 s in the future [ 88%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpformat.cpp.o [ 88%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpmanager.cpp.o [ 88%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/helpwritercontext.cpp.o [ 88%] Building CXX object src/gromacs/onlinehelp/tests/CMakeFiles/onlinehelp-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 88%] Linking CXX executable ../../../../bin/onlinehelp-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 88%] Built target onlinehelp-test Scanning dependencies of target options-test make[3]: Warning: File 'src/gromacs/options/tests/CMakeFiles/options-test.dir/depend.make' has modification time 2.4 s in the future [ 88%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/abstractoptionstorage.cpp.o [ 88%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoption.cpp.o [ 88%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/filenameoptionmanager.cpp.o [ 88%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/option.cpp.o [ 88%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/optionsassigner.cpp.o [ 89%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/repeatingsection.cpp.o [ 89%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/timeunitmanager.cpp.o [ 89%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/treesupport.cpp.o [ 89%] Building CXX object src/gromacs/options/tests/CMakeFiles/options-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/options-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target options-test Scanning dependencies of target pbcutil-test make[3]: Warning: File 'src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/depend.make' has modification time 2.5 s in the future [ 89%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/com.cpp.o [ 89%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/mshift.cpp.o [ 89%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbc.cpp.o [ 89%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/pbcenums.cpp.o [ 89%] Building CXX object src/gromacs/pbcutil/tests/CMakeFiles/pbcutil-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/pbcutil-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target pbcutil-test Scanning dependencies of target random-test make[3]: Warning: File 'src/gromacs/random/tests/CMakeFiles/random-test.dir/depend.make' has modification time 2.5 s in the future [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/exponentialdistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/gammadistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/normaldistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/seed.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/tabulatednormaldistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/threefry.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformintdistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/uniformrealdistribution.cpp.o [ 89%] Building CXX object src/gromacs/random/tests/CMakeFiles/random-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/random-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target random-test Scanning dependencies of target restraintpotential-test make[3]: Warning: File 'src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/depend.make' has modification time 2.6 s in the future [ 89%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/manager.cpp.o [ 89%] Building CXX object src/gromacs/restraint/tests/CMakeFiles/restraintpotential-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/restraintpotential-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target restraintpotential-test Scanning dependencies of target table-test make[3]: Warning: File 'src/gromacs/tables/tests/CMakeFiles/table-test.dir/depend.make' has modification time 2.3 s in the future [ 89%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/splinetable.cpp.o [ 89%] Building CXX object src/gromacs/tables/tests/CMakeFiles/table-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/table-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target table-test Scanning dependencies of target taskassignment-test make[3]: Warning: File 'src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/depend.make' has modification time 2.5 s in the future [ 89%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/usergpuids.cpp.o [ 89%] Building CXX object src/gromacs/taskassignment/tests/CMakeFiles/taskassignment-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/taskassignment-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target taskassignment-test Scanning dependencies of target topology-test make[3]: Warning: File 'src/gromacs/topology/tests/CMakeFiles/topology-test.dir/depend.make' has modification time 2.5 s in the future [ 89%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/exclusionblocks.cpp.o [ 89%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/idef.cpp.o [ 89%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/mtop.cpp.o [ 89%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/symtab.cpp.o [ 89%] Building CXX object src/gromacs/topology/tests/CMakeFiles/topology-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/topology-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target topology-test Scanning dependencies of target pull-test make[3]: Warning: File 'src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/depend.make' has modification time 2.5 s in the future [ 89%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/pull.cpp.o [ 89%] Building CXX object src/gromacs/pulling/tests/CMakeFiles/pull-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 89%] Linking CXX executable ../../../../bin/pull-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 89%] Built target pull-test Scanning dependencies of target simd-test make[3]: Warning: File 'src/gromacs/simd/tests/CMakeFiles/simd-test.dir/depend.make' has modification time 2.1 s in the future [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/base.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/bootstrap_loadstore.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_util.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/scalar_math.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_floatingpoint_util.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_integer.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_math.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_memory.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd_vector_operations.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4.cpp.o [ 89%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_floatingpoint.cpp.o [ 90%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_math.cpp.o [ 90%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/simd4_vector_operations.cpp.o [ 90%] Building CXX object src/gromacs/simd/tests/CMakeFiles/simd-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 90%] Linking CXX executable ../../../../bin/simd-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 90%] Built target simd-test Scanning dependencies of target compat-test make[3]: Warning: File 'src/gromacs/compat/tests/CMakeFiles/compat-test.dir/depend.make' has modification time 2.5 s in the future [ 90%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/mp11.cpp.o [ 90%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/pointers.cpp.o [ 90%] Building CXX object src/gromacs/compat/tests/CMakeFiles/compat-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 90%] Linking CXX executable ../../../../bin/compat-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 90%] Built target compat-test Scanning dependencies of target gmxana-test make[3]: Warning: File 'src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/depend.make' has modification time 2.5 s in the future [ 90%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/entropy.cpp.o [ 90%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_traj.cpp.o [ 90%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_mindist.cpp.o [ 90%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/gmx_msd.cpp.o [ 90%] Building CXX object src/gromacs/gmxana/tests/CMakeFiles/gmxana-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 90%] Linking CXX executable ../../../../bin/gmxana-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 90%] Built target gmxana-test Scanning dependencies of target pdb2gmx3-test make[3]: Warning: File 'src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/depend.make' has modification time 2.5 s in the future [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/pdb2gmx.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx3-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 91%] Linking CXX executable ../../../../bin/pdb2gmx3-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 91%] Built target pdb2gmx3-test Scanning dependencies of target pdb2gmx2-test make[3]: Warning: File 'src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/depend.make' has modification time 2.6 s in the future [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/pdb2gmx.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx2-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 91%] Linking CXX executable ../../../../bin/pdb2gmx2-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 91%] Built target pdb2gmx2-test Scanning dependencies of target pdb2gmx1-test make[3]: Warning: File 'src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/depend.make' has modification time 2.5 s in the future [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/pdb2gmx.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/pdb2gmx1-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 91%] Linking CXX executable ../../../../bin/pdb2gmx1-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 91%] Built target pdb2gmx1-test Scanning dependencies of target gmxpreprocess-test make[3]: Warning: File 'src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/depend.make' has modification time 2.4 s in the future [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/editconf.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genconf.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genion.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/genrestr.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_atomtype.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/gpp_bond_atomtype.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/insert_molecules.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/readir.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/solvate.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/topdirs.cpp.o [ 91%] Building CXX object src/gromacs/gmxpreprocess/tests/CMakeFiles/gmxpreprocess-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 91%] Linking CXX executable ../../../../bin/gmxpreprocess-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 91%] Built target gmxpreprocess-test Scanning dependencies of target correlations-test make[3]: Warning: File 'src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/depend.make' has modification time 2.5 s in the future [ 92%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/autocorr.cpp.o [ 92%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/correlationdataset.cpp.o [ 92%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/expfit.cpp.o [ 92%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/manyautocorrelation.cpp.o [ 92%] Building CXX object src/gromacs/correlationfunctions/tests/CMakeFiles/correlations-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 92%] Linking CXX executable ../../../../bin/correlations-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 92%] Built target correlations-test Scanning dependencies of target analysisdata-test-shared make[3]: Warning: File 'src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/depend.make' has modification time 2.5 s in the future [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/datatest.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test-shared.dir/mock_datamodule.cpp.o [ 92%] Linking CXX static library ../../../../lib/libanalysisdata-test-shared.a make[3]: warning: Clock skew detected. Your build may be incomplete. [ 92%] Built target analysisdata-test-shared Scanning dependencies of target analysisdata-test make[3]: Warning: File 'src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/depend.make' has modification time 2.5 s in the future [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/analysisdata.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/arraydata.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/average.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/histogram.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/lifetime.cpp.o [ 92%] Building CXX object src/gromacs/analysisdata/tests/CMakeFiles/analysisdata-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 92%] Linking CXX executable ../../../../bin/analysisdata-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 92%] Built target analysisdata-test Scanning dependencies of target coordinateio-test make[3]: Warning: File 'src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/depend.make' has modification time 2.4 s in the future [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/builder.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadaptercontainer.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/outputadapters.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/requirements.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setatoms.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setbothtime.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/setstarttime.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/settimestep.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/testmodule.cpp.o [ 92%] Building CXX object src/gromacs/coordinateio/tests/CMakeFiles/coordinateio-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 92%] Linking CXX executable ../../../../bin/coordinateio-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 92%] Built target coordinateio-test Scanning dependencies of target trajectoryanalysis-test make[3]: Warning: File 'src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/depend.make' has modification time 2.3 s in the future [ 92%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/moduletest.cpp.o [ 92%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/angle.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/clustsize.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/cmdlinerunner.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/convert_trj.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/distance.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/extract_cluster.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/freevolume.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/pairdist.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/rdf.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/sasa.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/select.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/surfacearea.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/topologyinformation.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/trajectory.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/unionfind.cpp.o [ 93%] Building CXX object src/gromacs/trajectoryanalysis/tests/CMakeFiles/trajectoryanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 93%] Linking CXX executable ../../../../bin/trajectoryanalysis-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 93%] Built target trajectoryanalysis-test Scanning dependencies of target energyanalysis-test make[3]: Warning: File 'src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/depend.make' has modification time 2.6 s in the future [ 93%] Building CXX object src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/legacyenergy.cpp.o [ 93%] Building CXX object src/gromacs/energyanalysis/tests/CMakeFiles/energyanalysis-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 93%] Linking CXX executable ../../../../bin/energyanalysis-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 93%] Built target energyanalysis-test Scanning dependencies of target tool-test make[3]: Warning: File 'src/gromacs/tools/tests/CMakeFiles/tool-test.dir/depend.make' has modification time 2.5 s in the future [ 93%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/dump.cpp.o [ 93%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/helpwriting.cpp.o [ 93%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/report_methods.cpp.o [ 93%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/trjconv.cpp.o [ 93%] Building CXX object src/gromacs/tools/tests/CMakeFiles/tool-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 93%] Linking CXX executable ../../../../bin/tool-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 93%] Built target tool-test Scanning dependencies of target fileio-test make[3]: Warning: File 'src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/depend.make' has modification time 2.4 s in the future [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/checkpoint.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/confio.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/filemd5.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcserializer.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymap.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/mrcdensitymapheader.cpp.o [ 93%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/readinp.cpp.o [ 94%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/fileioxdrserializer.cpp.o [ 94%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/tngio.cpp.o [ 94%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/xvgio.cpp.o [ 94%] Building CXX object src/gromacs/fileio/tests/CMakeFiles/fileio-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 94%] Linking CXX executable ../../../../bin/fileio-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 94%] Built target fileio-test Scanning dependencies of target selection-test make[3]: Warning: File 'src/gromacs/selection/tests/CMakeFiles/selection-test.dir/depend.make' has modification time 2.4 s in the future [ 94%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/indexutil.cpp.o [ 94%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/nbsearch.cpp.o [ 94%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/poscalc.cpp.o [ 94%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectioncollection.cpp.o [ 94%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/selectionoption.cpp.o [ 95%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/toputils.cpp.o [ 95%] Building CXX object src/gromacs/selection/tests/CMakeFiles/selection-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 95%] Linking CXX executable ../../../../bin/selection-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 95%] Built target selection-test Scanning dependencies of target mdrun-tpi-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/depend.make' has modification time 2.5 s in the future [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/tpitest.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-tpi-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 95%] Linking CXX executable ../../../../bin/mdrun-tpi-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 95%] Built target mdrun-tpi-test Scanning dependencies of target mdrun-modules-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/depend.make' has modification time 2.5 s in the future [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/densityfittingmodule.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/interactiveMD.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/mimic.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-modules-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 95%] Linking CXX executable ../../../../bin/mdrun-modules-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 95%] Built target mdrun-modules-test Scanning dependencies of target mdrun-io-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/depend.make' has modification time 2.5 s in the future [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/checkpoint.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/exactcontinuation.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/grompp.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/initialconstraints.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/termination.cpp.o [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-io-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 95%] Linking CXX executable ../../../../bin/mdrun-io-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 95%] Built target mdrun-io-test Scanning dependencies of target mdrun-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/depend.make' has modification time 2.5 s in the future [ 95%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/ewaldsurfaceterm.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/multiple_time_stepping.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/orires.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/swapcoords.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/tabulated_bonded_interactions.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 96%] Linking CXX executable ../../../../bin/mdrun-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 96%] Built target mdrun-test Scanning dependencies of target mdrun-pme-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-pme-test.dir/depend.make' has modification time 2.5 s in the future [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pme-test.dir/pmetest.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 96%] Linking CXX executable ../../../../bin/mdrun-pme-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 96%] Built target mdrun-pme-test Scanning dependencies of target mdrun-output-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/depend.make' has modification time 2.5 s in the future [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/compressed_x_output.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/helpwriting.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/outputfiles.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/trajectory_writing.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-output-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 96%] Linking CXX executable ../../../../bin/mdrun-output-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 96%] Built target mdrun-output-test Scanning dependencies of target mdrun-non-integrator-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/depend.make' has modification time 2.4 s in the future [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/minimize.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/nonbonded_bench.cpp.o [ 96%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/normalmodes.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/rerun.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/simple_mdrun.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-non-integrator-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 97%] Linking CXX executable ../../../../bin/mdrun-non-integrator-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target mdrun-non-integrator-test Scanning dependencies of target mdrun-simulator-comparison-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/depend.make' has modification time 2.6 s in the future [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/simulator.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-simulator-comparison-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 97%] Linking CXX executable ../../../../bin/mdrun-simulator-comparison-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target mdrun-simulator-comparison-test Scanning dependencies of target mdrun-mpi-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/depend.make' has modification time 2.4 s in the future [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/domain_decomposition.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/minimize.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/mimic.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/multisim.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/multisimtest.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/replicaexchange.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/pmetest.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 97%] Linking CXX executable ../../../../bin/mdrun-mpi-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target mdrun-mpi-test Scanning dependencies of target mdrun-mpi-pme-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/depend.make' has modification time 2.5 s in the future [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/pmetest.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-pme-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 97%] Linking CXX executable ../../../../bin/mdrun-mpi-pme-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target mdrun-mpi-pme-test Scanning dependencies of target mdrun-mpi-coordination-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-test.dir/depend.make' has modification time 2.5 s in the future [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-test.dir/periodicactions.cpp.o [ 97%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrun-mpi-coordination-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 98%] Linking CXX executable ../../../../bin/mdrun-mpi-coordination-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 98%] Built target mdrun-mpi-coordination-test Scanning dependencies of target mdrunfep-test make[3]: Warning: File 'src/programs/mdrun/tests/CMakeFiles/mdrunfep-test.dir/depend.make' has modification time 2.5 s in the future [ 98%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrunfep-test.dir/freeenergy.cpp.o [ 98%] Building CXX object src/programs/mdrun/tests/CMakeFiles/mdrunfep-test.dir/__/__/__/testutils/unittest_main.cpp.o [ 98%] Linking CXX executable ../../../../bin/mdrunfep-test make[3]: warning: Clock skew detected. Your build may be incomplete. [ 98%] Built target mdrunfep-test Scanning dependencies of target gmxapi-test make[3]: Warning: File 'src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/depend.make' has modification time 2.5 s in the future [ 98%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/restraint.cpp.o [ 98%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/runner.cpp.o [ 98%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/status.cpp.o [100%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/stopsignaler.cpp.o [100%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/system.cpp.o [100%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/version.cpp.o [100%] Building CXX object src/api/cpp/tests/CMakeFiles/gmxapi-test.dir/__/__/__/testutils/unittest_main.cpp.o [100%] Linking CXX executable ../../../../bin/gmxapi-test make[3]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target gmxapi-test Scanning dependencies of target tests [100%] Built target tests Scanning dependencies of target run-ctest-nophys [100%] Running all tests except physical validation Test project /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build Start 1: NbLibListedForcesTests 1/71 Test #1: NbLibListedForcesTests ................ Passed 0.76 sec Start 2: NbLibSamplesTestArgon Could not find executable /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration Looked in the following places: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/argon-forces-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/argon-forces-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/argon-forces-integration Unable to find executable: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/argon-forces-integration 2/71 Test #2: NbLibSamplesTestArgon .................***Not Run 0.00 sec Start 3: NbLibSamplesTestMethaneWater Could not find executable /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration Looked in the following places: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/methane-water-integration /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Release/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Debug/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/MinSizeRel/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/RelWithDebInfo/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Deployment/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/methane-water-integration mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/Development/methane-water-integration Unable to find executable: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build/bin/methane-water-integration 3/71 Test #3: NbLibSamplesTestMethaneWater ..........***Not Run 0.00 sec Start 4: NbLibUtilTests 4/71 Test #4: NbLibUtilTests ........................ Passed 0.36 sec Start 5: NbLibSetupTests 5/71 Test #5: NbLibSetupTests ....................... Passed 0.34 sec Start 6: NbLibIntegrationTests 6/71 Test #6: NbLibIntegrationTests ................. Passed 0.41 sec Start 7: NbLibIntegratorTests 7/71 Test #7: NbLibIntegratorTests .................. Passed 0.35 sec Start 8: TestUtilsUnitTests 8/71 Test #8: TestUtilsUnitTests .................... Passed 1.48 sec Start 9: TestUtilsMpiUnitTests 9/71 Test #9: TestUtilsMpiUnitTests ................. Passed 0.34 sec Start 10: UtilityUnitTests 10/71 Test #10: UtilityUnitTests ...................... Passed 1.27 sec Start 11: UtilityMpiUnitTests 11/71 Test #11: UtilityMpiUnitTests ................... Passed 0.31 sec Start 12: MdlibUnitTest 12/71 Test #12: MdlibUnitTest ......................... Passed 4.66 sec Start 13: AwhTest 13/71 Test #13: AwhTest ............................... Passed 0.86 sec Start 14: DensityFittingAppliedForcesUnitTest 14/71 Test #14: DensityFittingAppliedForcesUnitTest ... Passed 0.41 sec Start 15: AppliedForcesUnitTest 15/71 Test #15: AppliedForcesUnitTest ................. Passed 0.27 sec Start 16: ListedForcesTest 16/71 Test #16: ListedForcesTest ...................... Passed 2.57 sec Start 17: CommandLineUnitTests 17/71 Test #17: CommandLineUnitTests .................. Passed 0.87 sec Start 18: DomDecTests 18/71 Test #18: DomDecTests ........................... Passed 0.32 sec Start 19: DomDecMpiTests 19/71 Test #19: DomDecMpiTests ........................ Passed 2.60 sec Start 20: EwaldUnitTests 20/71 Test #20: EwaldUnitTests ........................ Passed 6.26 sec Start 21: FFTUnitTests 21/71 Test #21: FFTUnitTests .......................... Passed 0.72 sec Start 22: GpuUtilsUnitTests 22/71 Test #22: GpuUtilsUnitTests ..................... Passed 2.01 sec Start 23: HardwareUnitTests 23/71 Test #23: HardwareUnitTests ..................... Passed 1.59 sec Start 24: MathUnitTests 24/71 Test #24: MathUnitTests ......................... Passed 0.93 sec Start 25: MdrunUtilityUnitTests 25/71 Test #25: MdrunUtilityUnitTests ................. Passed 0.33 sec Start 26: MdrunUtilityMpiUnitTests 26/71 Test #26: MdrunUtilityMpiUnitTests .............. Passed 0.37 sec Start 27: MDSpanTests 27/71 Test #27: MDSpanTests ........................... Passed 0.34 sec Start 28: MdtypesUnitTest 28/71 Test #28: MdtypesUnitTest ....................... Passed 1.83 sec Start 29: OnlineHelpUnitTests 29/71 Test #29: OnlineHelpUnitTests ................... Passed 0.85 sec Start 30: OptionsUnitTests 30/71 Test #30: OptionsUnitTests ...................... Passed 0.74 sec Start 31: PbcutilUnitTest 31/71 Test #31: PbcutilUnitTest ....................... Passed 1.13 sec Start 32: RandomUnitTests 32/71 Test #32: RandomUnitTests ....................... Passed 0.74 sec Start 33: RestraintTests 33/71 Test #33: RestraintTests ........................ Passed 0.31 sec Start 34: TableUnitTests 34/71 Test #34: TableUnitTests ........................ Passed 0.39 sec Start 35: TaskAssignmentUnitTests 35/71 Test #35: TaskAssignmentUnitTests ............... Passed 0.33 sec Start 36: TopologyTest 36/71 Test #36: TopologyTest .......................... Passed 0.76 sec Start 37: PullTest 37/71 Test #37: PullTest .............................. Passed 0.32 sec Start 38: SimdUnitTests 38/71 Test #38: SimdUnitTests ......................... Passed 0.41 sec Start 39: CompatibilityHelpersTests 39/71 Test #39: CompatibilityHelpersTests ............. Passed 0.31 sec Start 40: GmxAnaTest 40/71 Test #40: GmxAnaTest ............................ Passed 4.22 sec Start 41: GmxPreprocessTests 41/71 Test #41: GmxPreprocessTests .................... Passed 5.89 sec Start 42: Pdb2gmx1Test 42/71 Test #42: Pdb2gmx1Test .......................... Passed 10.94 sec Start 43: Pdb2gmx2Test 43/71 Test #43: Pdb2gmx2Test .......................... Passed 17.11 sec Start 44: Pdb2gmx3Test 44/71 Test #44: Pdb2gmx3Test .......................... Passed 31.45 sec Start 45: CorrelationsTest 45/71 Test #45: CorrelationsTest ...................... Passed 1.23 sec Start 46: AnalysisDataUnitTests 46/71 Test #46: AnalysisDataUnitTests ................. Passed 1.07 sec Start 47: CoordinateIOTests 47/71 Test #47: CoordinateIOTests ..................... Passed 2.29 sec Start 48: TrajectoryAnalysisUnitTests 48/71 Test #48: TrajectoryAnalysisUnitTests ........... Passed 6.76 sec Start 49: EnergyAnalysisUnitTests 49/71 Test #49: EnergyAnalysisUnitTests ............... Passed 1.45 sec Start 50: ToolUnitTests 50/71 Test #50: ToolUnitTests ......................... Passed 2.53 sec Start 51: FileIOTests 51/71 Test #51: FileIOTests ........................... Passed 0.70 sec Start 52: SelectionUnitTests 52/71 Test #52: SelectionUnitTests .................... Passed 5.07 sec Start 53: MdrunOutputTests 53/71 Test #53: MdrunOutputTests ...................... Passed 8.29 sec Start 54: MdrunModulesTests 54/71 Test #54: MdrunModulesTests ..................... Passed 8.03 sec Start 55: MdrunIOTests 55/71 Test #55: MdrunIOTests .......................... Passed 61.60 sec Start 56: MdrunTests 56/71 Test #56: MdrunTests ............................ Passed 18.35 sec Start 57: MdrunPmeTests 57/71 Test #57: MdrunPmeTests ......................... Passed 10.39 sec Start 58: MdrunNonIntegratorTests 58/71 Test #58: MdrunNonIntegratorTests ............... Passed 46.05 sec Start 59: MdrunTpiTests 59/71 Test #59: MdrunTpiTests ......................... Passed 3.00 sec Start 60: MdrunMpiTests 60/71 Test #60: MdrunMpiTests ......................... Passed 21.76 sec Start 61: MdrunMpiPmeTests 61/71 Test #61: MdrunMpiPmeTests ...................... Passed 11.03 sec Start 62: MdrunMpiCoordinationTestsOneRank 62/71 Test #62: MdrunMpiCoordinationTestsOneRank ...... Passed 124.26 sec Start 63: MdrunMpiCoordinationTestsTwoRanks 63/71 Test #63: MdrunMpiCoordinationTestsTwoRanks ..... Passed 146.25 sec Start 64: MdrunFEPTests 64/71 Test #64: MdrunFEPTests ......................... Passed 14.44 sec Start 65: MdrunSimulatorComparison 65/71 Test #65: MdrunSimulatorComparison .............. Passed 0.36 sec Start 66: GmxapiExternalInterfaceTests 66/71 Test #66: GmxapiExternalInterfaceTests .......... Passed 8.10 sec Start 67: GmxapiInternalInterfaceTests 67/71 Test #67: GmxapiInternalInterfaceTests .......... Passed 2.86 sec Start 68: regressiontests/complex 68/71 Test #68: regressiontests/complex ............... Passed 292.00 sec Start 69: regressiontests/freeenergy 69/71 Test #69: regressiontests/freeenergy ............ Passed 73.86 sec Start 70: regressiontests/rotation 70/71 Test #70: regressiontests/rotation .............. Passed 56.21 sec Start 71: regressiontests/essentialdynamics 71/71 Test #71: regressiontests/essentialdynamics ..... Passed 30.91 sec 97% tests passed, 2 tests failed out of 71 Label Time Summary: GTest = 614.31 sec*proc (65 tests) IntegrationTest = 220.34 sec*proc (18 tests) MpiTest = 306.92 sec*proc (8 tests) SlowTest = 345.19 sec*proc (8 tests) UnitTest = 48.78 sec*proc (39 tests) Total Test time (real) = 1070.44 sec The following tests FAILED: > 2 - NbLibSamplesTestArgon (Not Run) > 3 - NbLibSamplesTestMethaneWater (Not Run) > Errors while running CTest > make[3]: *** [CMakeFiles/run-ctest-nophys.dir/build.make:58: CMakeFiles/run-ctest-nophys] Error 8 > make[2]: *** [CMakeFiles/Makefile2:2716: CMakeFiles/run-ctest-nophys.dir/all] Error 2 > make[1]: *** [CMakeFiles/Makefile2:2695: CMakeFiles/check.dir/rule] Error 2 > make: *** [Makefile:249: check] Error 2 veeru@DESKTOP-RLC204T:/mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build$ sudo make install [sudo] password for veeru: -- Found OpenMP_C: -fopenmp -- Found OpenMP_CXX: -fopenmp -- Found OpenMP: TRUE -- Configuring done -- Generating done -- Build files have been written to: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build make[1]: Warning: File 'CMakeFiles/Makefile2' has modification time 61854 s in the future make[2]: Warning: File 'src/gromacs/selection/CMakeFiles/scanner.dir/progress.make' has modification time 61851 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/selection/CMakeFiles/scanner.dir/progress.make' has modification time 61850 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 0%] Built target scanner make[2]: Warning: File 'CMakeFiles/release-version-info.dir/progress.make' has modification time 61850 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'CMakeFiles/release-version-info.dir/progress.make' has modification time 61850 s in the future [ 1%] Generating release version information make[2]: warning: Clock skew detected. Your build may be incomplete. [ 1%] Built target release-version-info make[2]: Warning: File 'src/gromacs/CMakeFiles/tng_io_obj.dir/progress.make' has modification time 61778 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/CMakeFiles/tng_io_obj.dir/progress.make' has modification time 61778 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 2%] Built target tng_io_obj make[2]: Warning: File 'src/gromacs/CMakeFiles/tng_io_zlib.dir/progress.make' has modification time 61778 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/CMakeFiles/tng_io_zlib.dir/progress.make' has modification time 61778 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 4%] Built target tng_io_zlib make[2]: Warning: File 'src/gromacs/CMakeFiles/lmfit_objlib.dir/progress.make' has modification time 61776 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/CMakeFiles/lmfit_objlib.dir/progress.make' has modification time 61776 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 4%] Built target lmfit_objlib make[2]: Warning: File 'src/gromacs/CMakeFiles/thread_mpi.dir/progress.make' has modification time 61777 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/CMakeFiles/thread_mpi.dir/progress.make' has modification time 61777 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 7%] Built target thread_mpi make[2]: Warning: File 'src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/progress.make' has modification time 61775 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/linearalgebra/CMakeFiles/linearalgebra.dir/progress.make' has modification time 61774 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 25%] Built target linearalgebra make[2]: Warning: File 'src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/progress.make' has modification time 61773 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/modularsimulator/CMakeFiles/modularsimulator.dir/progress.make' has modification time 61772 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [ 26%] Built target modularsimulator make[2]: Warning: File 'src/gromacs/CMakeFiles/libgromacs.dir/progress.make' has modification time 61766 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/gromacs/CMakeFiles/libgromacs.dir/progress.make' has modification time 61756 s in the future [ 26%] Linking CXX shared library ../../lib/libgromacs.so make[2]: warning: Clock skew detected. Your build may be incomplete. [ 94%] Built target libgromacs make[2]: Warning: File 'api/gmxapi/CMakeFiles/gmxapi.dir/progress.make' has modification time 61688 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'api/gmxapi/CMakeFiles/gmxapi.dir/progress.make' has modification time 61687 s in the future [ 94%] Linking CXX shared library ../../lib/libgmxapi.so make[2]: warning: Clock skew detected. Your build may be incomplete. [ 95%] Built target gmxapi make[2]: Warning: File 'api/nblib/CMakeFiles/nblib.dir/progress.make' has modification time 61686 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'api/nblib/CMakeFiles/nblib.dir/progress.make' has modification time 61686 s in the future [ 95%] Linking CXX shared library ../../lib/libnblib.so make[2]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target nblib make[2]: Warning: File 'api/nblib/samples/CMakeFiles/methane-water-integration.dir/progress.make' has modification time 61683 s in the future Scanning dependencies of target methane-water-integration make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'api/nblib/samples/CMakeFiles/methane-water-integration.dir/progress.make' has modification time 61682 s in the future [ 97%] Building CXX object api/nblib/samples/CMakeFiles/methane-water-integration.dir/methane-water-integration.cpp.o [ 97%] Linking CXX executable ../../../bin/methane-water-integration make[2]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target methane-water-integration make[2]: Warning: File 'api/nblib/samples/CMakeFiles/argon-forces-integration.dir/progress.make' has modification time 61676 s in the future Scanning dependencies of target argon-forces-integration make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'api/nblib/samples/CMakeFiles/argon-forces-integration.dir/progress.make' has modification time 61675 s in the future [ 97%] Building CXX object api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o [ 97%] Linking CXX executable ../../../bin/argon-forces-integration make[2]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target argon-forces-integration make[2]: Warning: File 'src/external/googletest/googlemock/gtest/CMakeFiles/gtest.dir/flags.make' has modification time 61636 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/external/googletest/googlemock/gtest/CMakeFiles/gtest.dir/flags.make' has modification time 61636 s in the future [ 97%] Building CXX object src/external/googletest/googlemock/gtest/CMakeFiles/gtest.dir/src/gtest-all.cc.o [ 97%] Linking CXX shared library ../../../../../lib/libgtest.so make[2]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target gtest make[2]: Warning: File 'src/external/googletest/googlemock/CMakeFiles/gmock.dir/flags.make' has modification time 61624 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/external/googletest/googlemock/CMakeFiles/gmock.dir/flags.make' has modification time 61624 s in the future [ 97%] Building CXX object src/external/googletest/googlemock/CMakeFiles/gmock.dir/src/gmock-all.cc.o [ 97%] Linking CXX shared library ../../../../lib/libgmock.so make[2]: warning: Clock skew detected. Your build may be incomplete. [ 97%] Built target gmock make[2]: Warning: File 'src/testutils/CMakeFiles/testutils.dir/flags.make' has modification time 61609 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/testutils/CMakeFiles/testutils.dir/flags.make' has modification time 61608 s in the future [ 97%] Building CXX object src/testutils/CMakeFiles/testutils.dir/cmdlinetest.cpp.o [ 97%] Building CXX object src/testutils/CMakeFiles/testutils.dir/conftest.cpp.o [ 97%] Building CXX object src/testutils/CMakeFiles/testutils.dir/filematchers.cpp.o [ 97%] Building CXX object src/testutils/CMakeFiles/testutils.dir/interactivetest.cpp.o [ 97%] Building CXX object src/testutils/CMakeFiles/testutils.dir/loggertest.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpi_printer.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/mpitest.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/refdata_xml.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/simulationdatabase.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/stdiohelper.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/stringtest.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testasserts.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testfilemanager.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testfileredirector.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/test_device.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/test_hardware_environment.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testinit.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testmatchers.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/testoptions.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/textblockmatchers.cpp.o [ 98%] Building CXX object src/testutils/CMakeFiles/testutils.dir/tprfilegenerator.cpp.o [100%] Building CXX object src/testutils/CMakeFiles/testutils.dir/xvgtest.cpp.o [100%] Building CXX object src/testutils/CMakeFiles/testutils.dir/__/external/tinyxml2/tinyxml2.cpp.o [100%] Linking CXX shared library ../../lib/libtestutils.so make[2]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target testutils make[2]: Warning: File 'src/programs/CMakeFiles/gmx_objlib.dir/progress.make' has modification time 61169 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/programs/CMakeFiles/gmx_objlib.dir/progress.make' has modification time 61169 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target gmx_objlib make[2]: Warning: File 'src/programs/CMakeFiles/mdrun_objlib.dir/progress.make' has modification time 61169 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/programs/CMakeFiles/mdrun_objlib.dir/progress.make' has modification time 61169 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target mdrun_objlib make[2]: Warning: File 'src/programs/CMakeFiles/view_objlib.dir/progress.make' has modification time 61170 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/programs/CMakeFiles/view_objlib.dir/progress.make' has modification time 61169 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target view_objlib make[2]: Warning: File 'src/programs/CMakeFiles/gmx.dir/progress.make' has modification time 61167 s in the future make[2]: warning: Clock skew detected. Your build may be incomplete. make[2]: Warning: File 'src/programs/CMakeFiles/gmx.dir/progress.make' has modification time 61167 s in the future [100%] Linking CXX executable ../../bin/gmx make[2]: warning: Clock skew detected. Your build may be incomplete. [100%] Built target gmx make[1]: warning: Clock skew detected. Your build may be incomplete. make[1]: Warning: File 'CMakeFiles/Makefile2' has modification time 61170 s in the future make[1]: warning: Clock skew detected. Your build may be incomplete. Install the project... -- Install configuration: "Release" -- Installing: /usr/local/gromacs/share/gromacs/COPYING -- Installing: /usr/local/gromacs/share/man/man1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-anaeig.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-analyze.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-angle.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-awh.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-bar.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-bundle.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-check.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-chi.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-cluster.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-clustsize.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-confrms.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-convert-tpr.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-convert-trj.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-covar.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-current.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-density.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-densmap.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-densorder.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-dielectric.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-dipoles.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-disre.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-distance.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-dos.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-do_dssp.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-dump.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-dyecoupl.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-editconf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-eneconv.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-enemat.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-energy.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-extract-cluster.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-filter.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-freevolume.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-gangle.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-genconf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-genion.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-genrestr.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-grompp.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-gyrate.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-h2order.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-hbond.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-helix.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-helixorient.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-help.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-hydorder.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-insert-molecules.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-lie.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-make_edi.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-make_ndx.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-mdmat.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-mdrun.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-mindist.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-mk_angndx.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-msd.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-nmeig.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-nmens.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-nmr.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-nmtraj.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-nonbonded-benchmark.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-order.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-pairdist.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-pdb2gmx.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-pme_error.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-polystat.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-potential.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-principal.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rama.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rdf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-report-methods.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rms.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rmsdist.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rmsf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rotacf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-rotmat.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-saltbr.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-sans.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-sasa.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-saxs.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-select.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-sham.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-sigeps.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-solvate.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-sorient.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-spatial.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-spol.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-tcaf.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-traj.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-trajectory.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-trjcat.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-trjconv.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-trjorder.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-tune_pme.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-vanhove.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-velacc.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-view.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-wham.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-wheel.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-x2top.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx-xpm2ps.1 -- Installing: /usr/local/gromacs/share/man/man1/gmx.1 -- Installing: /usr/local/gromacs/share/gromacs/README.tutor -- Installing: /usr/local/gromacs/share/gromacs/README_FreeEnergyModifications.txt -- Installing: /usr/local/gromacs/share/gromacs/top -- Installing: /usr/local/gromacs/share/gromacs/top/amber03.ff -- Installing: /usr/local/gromacs/share/gromacs/top/amber03.ff/aminoacids.arn -- Installing: /usr/local/gromacs/share/gromacs/top/amber03.ff/aminoacids.c.tdb -- Installing: /usr/local/gromacs/share/gromacs/top/amber03.ff/aminoacids.hdb -- Installing: 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/usr/local/gromacs/include/gmxapi/mpi -- Installing: /usr/local/gromacs/include/gmxapi/mpi/gmxapi_mpi.h -- Installing: /usr/local/gromacs/include/gmxapi/session -- Installing: /usr/local/gromacs/include/gmxapi/session/resources.h -- Installing: /usr/local/gromacs/include/gmxapi/session.h -- Installing: /usr/local/gromacs/include/gmxapi/status.h -- Installing: /usr/local/gromacs/include/gmxapi/system.h -- Installing: /usr/local/gromacs/include/gmxapi/version.h -- Installing: /usr/local/gromacs/include/gmxapi/mpi/resourceassignment.h -- Installing: /usr/local/gromacs/lib/libgmxapi.so.0.2.0 -- Installing: /usr/local/gromacs/lib/libgmxapi.so.0 -- Installing: /usr/local/gromacs/lib/libgmxapi.so -- Installing: /usr/local/gromacs/share/cmake/gmxapi/gmxapi.cmake -- Installing: /usr/local/gromacs/share/cmake/gmxapi/gmxapi-release.cmake -- Installing: /usr/local/gromacs/share/cmake/gmxapi/gmxapi-config-version.cmake -- Installing: /usr/local/gromacs/share/cmake/gmxapi/gmxapi-config.cmake -- Installing: /usr/local/gromacs/lib/libnblib.so.0.1.0 -- Installing: /usr/local/gromacs/lib/libnblib.so.0 -- Installing: /usr/local/gromacs/lib/libnblib.so -- Installing: /usr/local/gromacs/include/nblib/basicdefinitions.h -- Installing: /usr/local/gromacs/include/nblib/box.h -- Installing: /usr/local/gromacs/include/nblib/exception.h -- Installing: /usr/local/gromacs/include/nblib/forcecalculator.h -- Installing: /usr/local/gromacs/include/nblib/integrator.h -- Installing: /usr/local/gromacs/include/nblib/interactions.h -- Installing: /usr/local/gromacs/include/nblib/molecules.h -- Installing: /usr/local/gromacs/include/nblib/kerneloptions.h -- Installing: /usr/local/gromacs/include/nblib/nblib.h -- Installing: /usr/local/gromacs/include/nblib/particlesequencer.h -- Installing: /usr/local/gromacs/include/nblib/particletype.h -- Installing: /usr/local/gromacs/include/nblib/simulationstate.h -- Installing: /usr/local/gromacs/include/nblib/topology.h -- Installing: /usr/local/gromacs/include/nblib/bondtypes.h -- Installing: /usr/local/gromacs/include/nblib/calculator.h -- Installing: /usr/local/gromacs/include/nblib/definitions.h -- Installing: /usr/local/gromacs/include/nblib/util/setup.h -- Installing: /usr/local/gromacs/lib/libgromacs.so.6.0.0 -- Installing: /usr/local/gromacs/lib/libgromacs.so.6 -- Installing: /usr/local/gromacs/lib/libgromacs.so -- Installing: /usr/local/gromacs/lib/pkgconfig/libgromacs.pc -- Installing: /usr/local/gromacs/share/cmake/gromacs/libgromacs.cmake -- Installing: /usr/local/gromacs/share/cmake/gromacs/libgromacs-release.cmake -- Installing: /usr/local/gromacs/share/cmake/gromacs/gromacs-config.cmake -- Installing: /usr/local/gromacs/share/cmake/gromacs/gromacs-config-version.cmake -- Installing: /usr/local/gromacs/share/cmake/gromacs/gromacs-toolchain.cmake -- Installing: /usr/local/gromacs/include/gromacs/utility/basedefinitions.h -- Installing: /usr/local/gromacs/include/gromacs/utility/current_function.h -- Installing: /usr/local/gromacs/include/gromacs/utility/gmxassert.h -- Installing: /usr/local/gromacs/include/gromacs/utility/real.h -- Installing: /usr/local/gromacs/include/gromacs/math/do_fit.h -- Installing: /usr/local/gromacs/include/gromacs/math/functions.h -- Installing: /usr/local/gromacs/include/gromacs/math/units.h -- Installing: /usr/local/gromacs/include/gromacs/math/utilities.h -- Installing: /usr/local/gromacs/include/gromacs/math/vec.h -- Installing: /usr/local/gromacs/include/gromacs/math/vectypes.h -- Installing: /usr/local/gromacs/include/gromacs/mdrun/simulationinputhandle.h -- Installing: /usr/local/gromacs/include/gromacs/restraint/restraintpotential.h -- Installing: /usr/local/gromacs/bin/gmx -- Up-to-date: /usr/local/gromacs/bin -- Installing: /usr/local/gromacs/bin/gmx-completion.bash -- Installing: /usr/local/gromacs/bin/gmx-completion-gmx.bash veeru@DESKTOP-RLC204T:/mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build$ sudo make check GROMACS is free software; you can redistribute it and/or modify it under the terms of the GNU Lesser General Public License as published by the Free Software Foundation; either version 2.1 of the License, or (at your option) any later version. GROMACS: gmx pdb2gmx, version 2021 Executable: /usr/local/gromacs/bin/gmx Data prefix: /usr/local/gromacs Working dir: /mnt/c/Users/veeru/Downloads/gromacs/gromacs-2021/build Command line: gmx pdb2gmx --version GROMACS version: 2021 Verified release checksum is 3e06a5865d6ff726fc417dea8d55afd37ac3cbb94c02c54c76d7a881c49c5dd8 Precision: mixed Memory model: 64 bit MPI library: thread_mpi OpenMP support: enabled (GMX_OPENMP_MAX_THREADS = 64) GPU support: CUDA SIMD instructions: AVX2_256 FFT library: fftw-3.3.8-sse2-avx RDTSCP usage: enabled TNG support: enabled Hwloc support: disabled Tracing support: disabled C compiler: /usr/bin/gcc GNU 9.3.0 C compiler flags: -mavx2 -mfma -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -O3 -DNDEBUG C++ compiler: /usr/bin/c++ GNU 9.3.0 C++ compiler flags: -mavx2 -mfma -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -O3 -DNDEBUG CUDA compiler: /usr/local/cuda/bin/nvcc nvcc: NVIDIA (R) Cuda compiler driver;Copyright (c) 2005-2020 NVIDIA Corporation;Built on Wed_Jul_22_19:09:09_PDT_2020;Cuda compilation tools, release 11.0, V11.0.221;Build cuda_11.0_bu.TC445_37.28845127_0 CUDA compiler flags:-std=c++17;-gencode;arch=compute_35,code=sm_35;-gencode;arch=compute_37,code=sm_37;-gencode;arch=compute_50,code=sm_50;-gencode;arch=compute_52,code=sm_52;-gencode;arch=compute_60,code=sm_60;-gencode;arch=compute_61,code=sm_61;-gencode;arch=compute_70,code=sm_70;-Wno-deprecated-gpu-targets;-gencode;arch=compute_35,code=compute_35;-gencode;arch=compute_50,code=compute_50;-gencode;arch=compute_52,code=compute_52;-gencode;arch=compute_60,code=compute_60;-gencode;arch=compute_61,code=compute_61;-gencode;arch=compute_70,code=compute_70;-gencode;arch=compute_75,code=compute_75;-gencode;arch=compute_80,code=compute_80;-use_fast_math;-D_FORCE_INLINES;-mavx2 -mfma -Wno-missing-field-initializers -fexcess-precision=fast -funroll-all-loops -fopenmp -O3 -DNDEBUG CUDA driver: 11.30 CUDA runtime: 11.0