Hi,
Many thanks for your response.
CMAKE_LINKER was
CMAKE_LINKER:FILEPATH=/usr/bin/ld
Then I have changed it to, as you suggested (though here is no ld file)
CMAKE_LINKER:FILEPATH=/home/khademul/bin/gcc11/bin/ld
//ADVANCED property for variable: CMAKE_LINKER
CMAKE_LINKER-ADVANCED:INTERNAL=1
However the problem persists and remains the same.
cmake … -DGMX_BUILD_OWN_FFTW=ON -DREGRESSIONTEST_DOWNLOAD=ON -DMPI_C_COMPILER=mpicc -DGMX_MPI=on -DCMAKE_INSTALL_PREFIX=/home/khademul/bin/gromacs -DCMAKE_C_COMPILER=/home/khademul/bin/gcc11/bin/gcc -DCMAKE_CXX_COMPILER=/home/khademul/bin/gcc11/bin/g++ -DCMAKE_LINKER=/home/khademul/bin/gcc11/bin/ld
…
…
make
…
…
[ 98%] Built target nblib
[ 98%] Building CXX object api/nblib/samples/CMakeFiles/argon-forces-integration.dir/argon-forces-integration.cpp.o
[100%] Linking CXX executable …/…/…/bin/argon-forces-integration
/home/khademul/bin/gromacs-2021.3/build/lib/libgromacs_mpi.so.6: undefined reference to GOMP_loop_nonmonotonic_dynamic_next@GOMP_4.5' /home/khademul/bin/gromacs-2021.3/build/lib/libgromacs_mpi.so.6: undefined reference to GOMP_loop_nonmonotonic_dynamic_start@GOMP_4.5’
collect2: error: ld returned 1 exit status
make[2]: *** [bin/argon-forces-integration] Error 1
make[1]: *** [api/nblib/samples/CMakeFiles/argon-forces-integration.dir/all] Error 2
make: *** [all] Error 2
I do not have root permission and CMAKE, GCC etc installed locally. (default things are tool old version)
module load openmpi-1.8-x86_64
module load tools/openBLAS-0.2.18
module load lib/OpenBLAS-0.3.9
module load compilers/python-3.6.2-gcc
cmake version 3.20.0-rc4
gcc version 11.2.0
thanks, # any more suggestions?