GROMACS user forum


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About the GROMACS user forum category
1 111 April 24, 2020
Welcome to GROMACS forum

Here you find and provide support to GROMACS , a free and open-source software suite for high-performance molecular dynamics and output analysis. GROMACS user forum. Discussion forum for installation and usage of GROMA…

5 389 May 11, 2020
Simulated annealing LINCS Errors
3 5 September 18, 2020
Lincs error on newer but not older machines after installing gmx2020.3
2 11 September 18, 2020
New NVIDIA RTX 3080 vs 2080Ti GPUs
2 41 September 18, 2020
Cgenff_charmm2gmx.py Import Error Inquiry
1 2 September 18, 2020
JZ4 Topology via cgenff_charmm2gmx.py Inquiry
1 3 September 18, 2020
Gromacs compile on Tesla C2075
1 2 September 18, 2020
Concentration of a peptide or protein
2 4 September 18, 2020
Weeks-Chandler-Anderson Potential
6 12 September 18, 2020
Running GROMACS on GPU cluster
1 4 September 18, 2020
COM pulling
2 28 September 18, 2020
Hard Spheres Brownian Dynamics LJ Energy
3 13 September 18, 2020
Fe2+ and Mn2+ force field parameters
9 34 September 18, 2020
Distance between two atoms exceeds box length
13 57 September 17, 2020
Salt aggregration during simulation
4 20 September 17, 2020
Usage of GMXLIB
2 11 September 17, 2020
Weird RMSF curve
17 76 September 17, 2020
Zeta potential from simulation
1 9 September 17, 2020
Error (gmx mdrun -deffnm nvt) on the KALP-15 mebrana simulation
4 19 September 17, 2020
Parameters for pulling through membrane
3 18 September 16, 2020
Plotting a distance vs time graph
5 15 September 16, 2020
Seemingly unresolvable PBC problem on protein complex
2 26 September 16, 2020
Order Parmeter S^2 using rotacf
2 30 September 16, 2020
Which OS X version would you recommend for compiling GROMACS with OpenMPI (and avoid seg. fault)
7 40 September 16, 2020
Installing Gromacs for use in Python
2 30 September 16, 2020
RMSD values
2 15 September 16, 2020
Provide External Potential for Pulling Simulations
4 34 September 15, 2020
How can I do MD simulation with Gromacs for a large protein?
5 14 September 15, 2020
I want to calculate the dipole moment for a protein by Gromacs
5 24 September 15, 2020