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How to use the forum
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0
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4220
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October 28, 2020
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About the User discussions category
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0
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2135
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April 24, 2020
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Inconsistent shifts
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2
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3877
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September 14, 2026
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PBCs in a slightly complex system
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2
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27
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September 13, 2026
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Port LignAmb25 Force Field to GROMACS
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3
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108
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September 10, 2026
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SAM co-factor with CHARMM force field for GROMACS silmualtion
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14
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445
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September 8, 2026
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Unable to select specific chains (A/B) for a dimer in v2024.3
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6
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79
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September 8, 2026
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Having issue with gmx SASA giving values of 0 for specific protein
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0
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32
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September 8, 2026
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Gmx dssp gives wrong secondary structure results
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6
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1385
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September 7, 2026
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How can I fix a "bi-layer" during an NPT simulation?
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3
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60
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September 7, 2026
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Does the Ewald3D-C long-range correction include a virial contribution?
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2
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54
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September 4, 2026
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Using GROMACS and PLUMED to do a metadynamics simulations
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1
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60
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September 2, 2026
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PBC Box Failing to Expand to Input .gro File Parameters + Unwanted Position Restrained Protein
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3
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82
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September 2, 2026
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Gromacs for Windows on Arm Architecture for Copilot+PC
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6
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104
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September 2, 2026
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Hydrogen Mass Repartitioning-Help
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1
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44
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September 2, 2026
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Solvent accessible surface area calculation in GROMACS
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2
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54
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September 2, 2026
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Constant Electric Field and Membrane Voltage in GROMACS
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1
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42
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September 1, 2026
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Low GROMACS Performance on RTX 5090 Workstation
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4
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216
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August 31, 2026
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Subject: How to calculate protein spreading area on a membrane over time using GROMACS and Martini 3
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1
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55
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August 31, 2026
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Hamiltonian replica exchange error
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1
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39
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August 28, 2026
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NPγT vs NPT for Unrestrained Membrane Equilibration Using the CHARMM36 Force Field
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10
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155
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August 26, 2026
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How to add salt?
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2
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91
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August 26, 2026
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SALADCLOUD Gromacs minimization error Inquiry?
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2
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47
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August 26, 2026
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Results differs in different versions
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2
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56
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August 25, 2026
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Wrapping Inquiry
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4
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79
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August 24, 2026
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MDrun: Simulation speed jumping a factor of 10 with a gpu executable
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6
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91
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August 24, 2026
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Removal of Tabulated Potentials from GROMACS 2020
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2
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666
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August 24, 2026
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Query on electrostatic treatment for slab/interface systems (2D periodicity)
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1
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38
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August 24, 2026
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Loss of performance in v. 2021
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27
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1922
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August 24, 2026
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CUDA illegal memory access during NPT equilibration
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9
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109
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August 21, 2026
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