How to use the forum
|
|
1
|
1593
|
October 28, 2020
|
About the User discussions category
|
|
0
|
729
|
April 24, 2020
|
Error in running pdb2gmx for protein with modified residue
|
|
0
|
6
|
September 28, 2023
|
Martini v2 to Martini v3 atom types?
|
|
0
|
6
|
September 28, 2023
|
Gromacs 2020 installation error
|
|
0
|
5
|
September 28, 2023
|
H-bond data analysis
|
|
2
|
43
|
September 27, 2023
|
How can I pull 1 out of several molecules towards bilayer center
|
|
12
|
81
|
September 28, 2023
|
Gromacs problem
|
|
0
|
9
|
September 28, 2023
|
Berger Lipid Parameters and Membrane Simulations
|
|
0
|
5
|
September 28, 2023
|
Problem in umbrella sampling
|
|
11
|
77
|
September 28, 2023
|
How to connect the pip install with the location of GROMACS installation in PowerShell on windows 11
|
|
2
|
42
|
September 28, 2023
|
Extreme RAM consumption of an md simulation
|
|
11
|
55
|
September 28, 2023
|
OPC water from CHARMM-GUI
|
|
8
|
1212
|
September 28, 2023
|
Vacuum Simulations in GROMACS 2020+
|
|
3
|
42
|
September 27, 2023
|
Apparent hbond bug with -nomerge flag
|
|
0
|
11
|
September 27, 2023
|
Transverse Current Autocorrelation Function, FV and FFV
|
|
1
|
17
|
September 27, 2023
|
GROMACS tutorial problem
|
|
7
|
190
|
September 27, 2023
|
Atom C7 in residue DT 3 was not found in rtp entry DT with 32 atoms while sorting atoms
|
|
0
|
9
|
September 27, 2023
|
CUDA enabled Gromacs Cp2k installation error
|
|
0
|
10
|
September 27, 2023
|
Question from umbrella sampling
|
|
0
|
16
|
September 27, 2023
|
Generating PDB file for custom DNA sequence?
|
|
0
|
8
|
September 27, 2023
|
How to add an organic molecule in an enzym's active pocket?
|
|
2
|
26
|
September 27, 2023
|
Segmentation fault (core dumped) during NVT md
|
|
2
|
33
|
September 27, 2023
|
QM/MM CP2K + GROMACS Running mdrun error
|
|
1
|
132
|
September 26, 2023
|
Calculating energy between a single cation and the rest of the system?
|
|
0
|
11
|
September 26, 2023
|
Position restraints with arbitrary reference positions?
|
|
2
|
19
|
September 26, 2023
|
Installation error with Plumed (v2.9) Gromacs (23.2) install
|
|
0
|
18
|
September 26, 2023
|
Error: atom C1 not found in buiding block 1MET while combining tdb and rtp
|
|
2
|
23
|
September 26, 2023
|
How can I visualize my md files on the VMD? and which files should I use?
|
|
0
|
20
|
September 26, 2023
|
how to distribute 20 polymers (ligand) randomly around the target protein to study interactions
|
|
6
|
204
|
September 26, 2023
|