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How to use the forum
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0
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4232
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October 28, 2020
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About the User discussions category
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0
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2138
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April 24, 2020
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Advice on High Penalty in CGenff generated topology
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0
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15
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September 20, 2026
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Addition of AMBER OL3 Force field in GROMACS
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0
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33
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September 17, 2026
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PBCs in a slightly complex system
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7
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102
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September 15, 2026
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Inconsistent shifts
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3
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3905
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September 14, 2026
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Port LignAmb25 Force Field to GROMACS
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3
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123
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September 10, 2026
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SAM co-factor with CHARMM force field for GROMACS silmualtion
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14
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466
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September 8, 2026
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Unable to select specific chains (A/B) for a dimer in v2024.3
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6
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96
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September 8, 2026
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Having issue with gmx SASA giving values of 0 for specific protein
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0
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46
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September 8, 2026
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Gmx dssp gives wrong secondary structure results
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6
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1394
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September 7, 2026
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How can I fix a "bi-layer" during an NPT simulation?
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3
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67
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September 7, 2026
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Does the Ewald3D-C long-range correction include a virial contribution?
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2
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58
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September 4, 2026
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Using GROMACS and PLUMED to do a metadynamics simulations
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1
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66
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September 2, 2026
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PBC Box Failing to Expand to Input .gro File Parameters + Unwanted Position Restrained Protein
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3
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84
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September 2, 2026
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Gromacs for Windows on Arm Architecture for Copilot+PC
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6
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109
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September 2, 2026
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Hydrogen Mass Repartitioning-Help
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1
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54
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September 2, 2026
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Solvent accessible surface area calculation in GROMACS
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2
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60
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September 2, 2026
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Constant Electric Field and Membrane Voltage in GROMACS
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1
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53
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September 1, 2026
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Low GROMACS Performance on RTX 5090 Workstation
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4
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239
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August 31, 2026
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Subject: How to calculate protein spreading area on a membrane over time using GROMACS and Martini 3
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1
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59
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August 31, 2026
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Hamiltonian replica exchange error
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1
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42
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August 28, 2026
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NPγT vs NPT for Unrestrained Membrane Equilibration Using the CHARMM36 Force Field
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10
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161
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August 26, 2026
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How to add salt?
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2
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93
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August 26, 2026
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SALADCLOUD Gromacs minimization error Inquiry?
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2
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47
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August 26, 2026
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Results differs in different versions
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2
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58
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August 25, 2026
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Wrapping Inquiry
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4
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81
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August 24, 2026
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MDrun: Simulation speed jumping a factor of 10 with a gpu executable
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6
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96
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August 24, 2026
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Removal of Tabulated Potentials from GROMACS 2020
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2
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668
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August 24, 2026
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Query on electrostatic treatment for slab/interface systems (2D periodicity)
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1
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42
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August 24, 2026
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