|
Steered MD simulation of ligand through membrane protein
|
|
2
|
135
|
February 25, 2022
|
|
How to get the velocity of the COM of a pulling group?
|
|
6
|
188
|
February 22, 2022
|
|
Water flow through a nanopore
|
|
2
|
99
|
January 28, 2022
|
|
How to pull a molecule across the bilayer?
|
|
5
|
217
|
January 25, 2022
|
|
Steered MD pulling rate does not result in desired final pulling distance
|
|
2
|
87
|
November 22, 2021
|
|
Pulling a ligand out of the active site of a protein for PMF analysis
|
|
3
|
130
|
October 22, 2021
|
|
How would you avoid the case that an SMD stops if d > L/2?
|
|
5
|
131
|
September 18, 2021
|
|
When pulling a group of a simulation system, how does each atom feel the pulling force?
|
|
2
|
213
|
September 15, 2021
|
|
Constant-force vs constant velocity
|
|
0
|
92
|
September 12, 2021
|
|
AWH reaction coordinate
|
|
0
|
146
|
July 9, 2021
|
|
How to pull a molecule across a bilayer with fixed boundaries?
|
|
14
|
352
|
June 25, 2021
|
|
Pull Code operation
|
|
0
|
115
|
April 30, 2021
|
|
PMF for angle rotations
|
|
1
|
120
|
March 29, 2021
|
|
How does Pull code apply potential?
|
|
1
|
111
|
March 25, 2021
|
|
Pull code error in Gromacs version 2019.6
|
|
5
|
819
|
March 18, 2021
|