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How to understand the output after pulling force is applied?
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7
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36
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September 18, 2024
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How to apply constant pull force at two ends of a molecule?
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2
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38
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September 10, 2024
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Pull code for a single window
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3
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16
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August 22, 2024
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Soft/Stiff Spring
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1
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23
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August 19, 2024
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Free energy calculation with fixed relative position
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2
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33
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August 12, 2024
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Question about absolute reference point/warning for pulling a protein between solvents
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0
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20
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July 14, 2024
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Another Problem with Distances Between Pull Groups
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3
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445
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July 14, 2024
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Issues with Pulling Protein Through a Pore: High Forces and Restraint Effects
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2
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77
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July 11, 2024
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COM pulling of large groups:
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1
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111
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May 6, 2024
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Steered MD doesn't produce expected force graph
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1
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146
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April 8, 2024
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Assistance Needed with Pulling a Protein Aggregate Through a Protein Pore
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1
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115
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April 1, 2024
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Setting pull_coord1_geometry = distance vs pull_coord1_geometry = direction
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0
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183
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March 27, 2024
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AWH reaction coordinate
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2
|
600
|
February 14, 2024
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Water flow through a nanopore
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3
|
489
|
February 2, 2024
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Using AWH for bilayer permeability
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15
|
803
|
December 21, 2023
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An error occurred in the pull code to implement the methane gas compression process under a certain
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0
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171
|
December 8, 2023
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Pulling seven reaction coordinates
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17
|
659
|
August 22, 2023
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PMF of a small molecule across a slab that has vapor-liquid interface
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1
|
363
|
August 21, 2023
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Pulling with orientation and position constraints on particles
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0
|
255
|
August 8, 2023
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Pulling a simulated AFM tip on to lipid bilayers
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0
|
277
|
June 19, 2023
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How to put constraints on MARTINI beads
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0
|
309
|
June 19, 2023
|
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Pull code distance restraint
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2
|
726
|
June 7, 2023
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Constraining two water droplets at constant distance between their COMs using pull code
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33
|
882
|
May 9, 2023
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Pull_f and Pull_X graphs showing sharp peaks
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2
|
280
|
April 18, 2023
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How to apply pulling force in one helix of a single chain globular protein to perform SMD?
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|
10
|
1003
|
March 24, 2023
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Pull code error in Gromacs version 2019.6
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6
|
2409
|
November 22, 2022
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Negative force from pulling simulation
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5
|
742
|
November 16, 2022
|
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Steered MD simulation of ligand through membrane protein
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|
2
|
765
|
February 25, 2022
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How to get the velocity of the COM of a pulling group?
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6
|
873
|
February 22, 2022
|
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How to pull a molecule across the bilayer?
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5
|
1380
|
January 25, 2022
|