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Pull code on a long filament
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7
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74
|
August 12, 2025
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Osmotic pressure simulations using the pull code
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6
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75
|
August 7, 2025
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Query about pullf.xvg plot
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4
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54
|
July 23, 2025
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Pulling simulations help
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1
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54
|
June 28, 2025
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Simple Pulling script 1D 1 group
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0
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20
|
May 17, 2025
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LINCS error while performing pull simulations?
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17
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104
|
March 18, 2025
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Unfolding a 574 aa protein
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0
|
43
|
February 3, 2025
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Simultaneous Pulling of Multiple Protein Segments to Different Target Distances in GROMACS
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4
|
70
|
December 2, 2024
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Pull-force error
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5
|
43
|
November 15, 2024
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Gromacs umbrella sampling error for pull force calculation
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4
|
105
|
October 30, 2024
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Rate and force unit conversion for pulling paramters
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1
|
140
|
October 2, 2024
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How to understand the output after pulling force is applied?
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11
|
378
|
September 20, 2024
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How to apply constant pull force at two ends of a molecule?
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2
|
177
|
September 10, 2024
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Pull code for a single window
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3
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30
|
August 22, 2024
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Soft/Stiff Spring
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1
|
77
|
August 19, 2024
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Free energy calculation with fixed relative position
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2
|
82
|
August 12, 2024
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Question about absolute reference point/warning for pulling a protein between solvents
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0
|
83
|
July 14, 2024
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Another Problem with Distances Between Pull Groups
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3
|
761
|
July 14, 2024
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Issues with Pulling Protein Through a Pore: High Forces and Restraint Effects
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2
|
98
|
July 11, 2024
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COM pulling of large groups:
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1
|
375
|
May 6, 2024
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Steered MD doesn't produce expected force graph
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1
|
194
|
April 8, 2024
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Assistance Needed with Pulling a Protein Aggregate Through a Protein Pore
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1
|
190
|
April 1, 2024
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Setting pull_coord1_geometry = distance vs pull_coord1_geometry = direction
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0
|
240
|
March 27, 2024
|
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AWH reaction coordinate
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2
|
652
|
February 14, 2024
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Water flow through a nanopore
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3
|
551
|
February 2, 2024
|
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Using AWH for bilayer permeability
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15
|
1078
|
December 21, 2023
|
|
An error occurred in the pull code to implement the methane gas compression process under a certain
|
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0
|
187
|
December 8, 2023
|
|
Pulling seven reaction coordinates
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|
17
|
928
|
August 22, 2023
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|
PMF of a small molecule across a slab that has vapor-liquid interface
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|
1
|
397
|
August 21, 2023
|
|
Pulling with orientation and position constraints on particles
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|
0
|
274
|
August 8, 2023
|