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How to predict low temperature structure of ionic liquids using MD simulation?
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0
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6
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May 6, 2021
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Trouble understanding bonded cut-off distance in DD
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1
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21
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May 5, 2021
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Inquiries about Electrostatic potential analysis by the gmx_potential tool
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1
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23
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May 4, 2021
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Number of pair interactions
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0
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14
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May 3, 2021
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Pull Code operation
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0
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21
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April 30, 2021
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Metadynamics run using GROMACS/2020.4-intel-2020u2-PLUMED-2.7.0 fails
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8
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31
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April 28, 2021
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Domain decomposition error + Setting MPI ranks compatible with custom domains
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0
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19
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April 28, 2021
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Increase Performance of the simulation
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3
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89
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April 27, 2021
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1GPU vs 4 GPU per single node; performance
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6
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108
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April 23, 2021
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Shrinking PBC box during targeted MD run
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6
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39
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April 23, 2021
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Continue simulation without cpt file?
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2
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49
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April 21, 2021
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Problem with energy exclusion groups using gmx mdrun -membed
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2
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21
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April 20, 2021
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Optimizing the MD run
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1
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25
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April 15, 2021
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Domain Decomposition issue upgrading from v2016.2 to v2021.1
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2
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24
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April 15, 2021
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Rtp file and gro file
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2
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33
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April 14, 2021
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Is it possible in GROMACS to save checkpoint file every specific step?
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1
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24
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April 14, 2021
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Gromacs MD
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4
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48
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April 13, 2021
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Not able to see any acceleration when using two nodes
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0
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19
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April 13, 2021
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Speed Comparision against Maestro
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11
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132
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April 12, 2021
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Reducing EDR file output
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4
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23
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April 12, 2021
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Performance degradation on 2021.1 with RTX 3070
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1
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53
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April 9, 2021
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How to solve inconsistent shifts over periodic boundaries in protein-dna run in minimization step?
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8
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54
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April 6, 2021
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Error after adding hydrogen to carbon nanotube
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1
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26
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April 6, 2021
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Problem in the mdrun step for the system containing two parallel silica plates
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1
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17
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April 6, 2021
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Does the calculation of PMF depend on the path of the reaction coordinate?
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1
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36
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April 1, 2021
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Getting good gromacs simulations performance in HPC -reg
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1
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32
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April 1, 2021
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Parallelization over several GPU nodes
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2
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45
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March 30, 2021
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Single ion virtual sites using [ virtual_sites1 ] in Gromacs 2021
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4
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29
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March 30, 2021
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Energy issues when restarting simulation from checkpoint
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1
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21
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March 30, 2021
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PME tuning/rcoulomb scaling
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2
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31
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March 29, 2021
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