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Installation failed test 70/78
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2
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58
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May 27, 2022
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Status of GPU Direct Implementation
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4
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86
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May 27, 2022
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Drift in coordinates of lipid molecule on xy plane
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0
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9
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May 25, 2022
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Simulations with multiple GPUs
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3
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49
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May 24, 2022
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Running plumed with gromacs
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5
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39
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May 20, 2022
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Regarding the use of -table and -tablep
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2
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21
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May 19, 2022
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Mdrun error with GPU in MacOS
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3
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68
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May 18, 2022
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Is that possible to update the hbond calculation without generating a new trajectory file?
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4
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35
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May 14, 2022
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Protein come out of the box but trjconv command didn't fix the problem
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5
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140
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May 3, 2022
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Umbrella sampling and cylinder geometry
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3
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84
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May 3, 2022
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Lipid bilayer membrane splits into two after nvt equilibration?
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0
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23
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May 3, 2022
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Moving a ligand through a beta barrel membrane protein using steered MD
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6
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52
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April 28, 2022
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A question about gen_seed in the log file
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4
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55
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April 20, 2022
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Gromacs freeze proplems
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2
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46
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April 20, 2022
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NPT production run crash "94 particles communicated to PME rank 2 are more than 2/3 times..."
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1
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34
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April 14, 2022
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PME GPU does not support interpolation orders other than 4?!
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1
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47
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April 13, 2022
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Mpirun for mdrun
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0
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31
|
April 13, 2022
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Problem with CHARMM virtual sites in drug molecules
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4
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48
|
April 13, 2022
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Zero interaction energy from mdrun -rerun in GMX 2020 vs non zero energies in GMX 2018
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7
|
321
|
April 11, 2022
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How to avoid the molecules being too close together in multiple molecules MD simulation?
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6
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115
|
April 11, 2022
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Can we convert xtc to cms of desmond for analysis
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1
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66
|
April 10, 2022
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Selective integrated tempering sampling?
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0
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25
|
April 10, 2022
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Error during EM process
|
|
10
|
60
|
April 9, 2022
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MD Analysis
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2
|
53
|
April 8, 2022
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Invalid line in fnIII-12_SAMch3.gro for atom 1417
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5
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26
|
April 8, 2022
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Error in pdb2gmx
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2
|
50
|
April 7, 2022
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Errors Running Gromacs Simulation on HPC
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0
|
47
|
April 6, 2022
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Validation of MD simulation results
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1
|
50
|
April 6, 2022
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Output file precision setting
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0
|
32
|
April 6, 2022
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Why is it different every time the interaction energy is calculated?
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|
8
|
83
|
April 6, 2022
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