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PBC = xy slow performance
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0
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20
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April 21, 2024
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Interpretation of wham and pmf
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0
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15
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April 21, 2024
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CMake Warning at cmake/gmxDetectCpu.cmake:98 (message)
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0
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20
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April 21, 2024
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Running simulation with a Packmol box
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1
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27
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April 20, 2024
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PBC = xy with pressure coupling gives erroneous results
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2
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41
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April 20, 2024
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Energy minimization has stopped
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2
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3322
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April 20, 2024
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Estimation of stress on structure
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0
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25
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April 18, 2024
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Tutorial of umbrella sampling. VMD visualization code
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1
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25
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April 19, 2024
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Bond between protein and ligand
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4
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51
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April 19, 2024
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MDtutorial ligand restraints: Cannot use restrained groups for this system
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1
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24
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April 19, 2024
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Glycosylation Chain ( PTM) on a protein
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0
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27
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April 19, 2024
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Colvars: Error: keyword "customfunction" is not supported
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2
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29
|
April 19, 2024
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Ensuring 4-point water model is rigid
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0
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23
|
April 18, 2024
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Warning: pressure scaling more than 1%
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3
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51
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April 18, 2024
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Installing gromacs2024+plumed2.9 on apple silicon with GPU support
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2
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33
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April 18, 2024
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How to perform a MDs of a phosphorylated protein
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1
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35
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April 18, 2024
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I have error on dowload.website is 404 error(https://www.gromacs.org/2023/download.html)
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1
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231
|
August 2, 2023
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Assessing the stability of a mutant protein withGROMACS
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1
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35
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April 18, 2024
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Protein generated with CHARMM36 FF and membrane generated with Bilayer Builder CHARMGU don't match
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1
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26
|
April 18, 2024
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Pressure scaling more than 1% in production
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6
|
78
|
April 18, 2024
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Invalid Pairs Type Error
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0
|
18
|
April 18, 2024
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MD simulation of a bridging His coordinated to two ZN atoms
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4
|
47
|
April 18, 2024
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How to solve :2 particles communicated to PME rank 1 are more than 2/3 times the cut-off out?
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4
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58
|
April 18, 2024
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In need of guidance to use make_ndx
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4
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44
|
April 18, 2024
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Error cMake command line
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1
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37
|
April 17, 2024
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Unit of potential.xvg, charge.xvg, and field.xvg
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3
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50
|
April 17, 2024
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Protein-ligand simulation
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28
|
3229
|
April 17, 2024
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How to use VMD to show my Gromacs result?
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3
|
41
|
April 17, 2024
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Free Energy calculation for Protein ligand complex
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0
|
23
|
April 17, 2024
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Error while using position restarints in MD run
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|
15
|
44
|
April 16, 2024
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