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Atom Type Error in Gromacs
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0
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9
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December 3, 2024
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Umbrella sampling - what values of force constant and velocity should I use?
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11
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63
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December 3, 2024
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Umbrella sampling for membrane-peptide system
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3
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21
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December 3, 2024
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CgenFF ligand parameterization
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0
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6
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December 3, 2024
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CGenff Error: specified residue name does not match between str and mol2 files
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4
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2737
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December 3, 2024
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Please help me to solve this step in writing ligand topology
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0
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8
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December 2, 2024
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Hello all please help me for gromacs installation with cuda. I m getting following error
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8
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52
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December 2, 2024
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How to consume 100% gpu
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1
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13
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December 2, 2024
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Distorted crystal after EM
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0
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8
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December 2, 2024
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Is it necessary to apply external pressure in the deformation direction?
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2
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10
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December 2, 2024
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Gromacs On Laptop
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1
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9
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December 2, 2024
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How do I convert the parameters of Buckingham potential to the parameters of LJ
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0
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11
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December 2, 2024
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How to add nonstandard residue or cofactor in charmm36 force field for protein topol.top
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11
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32
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December 2, 2024
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Methionine in CHARMM36 crashes with HMR
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2
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16
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December 2, 2024
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Topology creation for an acylated amino acid in Charmm force field
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4
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54
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December 2, 2024
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GROMACS Simulation Restart Problem: gmx mdrun
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0
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12
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December 2, 2024
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No Default U-B Types Error fix
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3
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94
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December 2, 2024
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Simultaneous Pulling of Multiple Protein Segments to Different Target Distances in GROMACS
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4
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29
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December 2, 2024
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Parameterising a Morse potential
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3
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494
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December 2, 2024
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Membrane Protein ligand simulation
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0
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8
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December 2, 2024
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Hbond per residue is greater than the theoretical value
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0
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8
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December 2, 2024
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Hypervalent carbon (valence=5) not supported CGenFF
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5
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666
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December 2, 2024
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Not getting binding energy for each residue of protein-protein complexes
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0
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5
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December 1, 2024
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Gmx grompp is broken and distorting my input PDB?
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2
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13
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December 1, 2024
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Gromacs installation
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0
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8
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December 1, 2024
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Getting error while generating ligand topology
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0
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8
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December 1, 2024
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Lipid membrane energy minimization error
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0
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10
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December 1, 2024
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CMake error „at cmake/gmxManageSharedLibraries.cmake:133”
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1
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6
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November 30, 2024
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Chemical permeation enhancer
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0
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11
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November 30, 2024
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Pdb2gmx error: atom CB used in topology entry is not found in the input file
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1
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22
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November 30, 2024
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