Regarding viscosity calculation
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8
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85
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September 25, 2023
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Pulling MD - pullforce has multiplie peaks
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0
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18
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September 25, 2023
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Error in recentering and rewrapping coordinates
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3
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40
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September 25, 2023
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Calculation stopped but job not finished
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4
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34
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September 25, 2023
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How to create a .tpr file with only C-alpha's information?
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0
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13
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September 25, 2023
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Error in python3 cgenff_charmm2gmx_py3_nx2.py ligand ligand_fix.mol2 ligand.str charmm36-jul2022.ff
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3
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132
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September 25, 2023
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GMX_order - Fatal error: grp 1 does not have same number of elements as grp 1
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5
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41
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September 24, 2023
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Enabling GPU after GROMACS installation
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1
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26
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September 24, 2023
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1 millisecond Coarse Grained simulation
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2
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35
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September 24, 2023
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Viscosity of isotropic system
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1
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178
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September 24, 2023
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Viscosity calculation by gmx tcaf
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3
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740
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September 24, 2023
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Which strategy is best for creating topology files for large molecules?
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7
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151
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September 23, 2023
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Protein-Protein simulation where one protein is a trimer
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1
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24
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September 23, 2023
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Different values for gen-seed in mdp file
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7
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368
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September 23, 2023
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How to calculate stiffness of the interface
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0
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19
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September 23, 2023
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Protein-ligand simulation gromacs 20.04
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0
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28
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September 23, 2023
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Gmx2023 vacuum bubbles between membrane leaflets
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9
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73
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September 22, 2023
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Gmx distance using bash for loop
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5
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591
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February 8, 2022
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Trouble understanding bonded cut-off distance in DD
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7
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664
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September 22, 2023
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Error build 2023.2, 2023.1 and 2022.6 with gcc/11.4.0 and cuda/11.8.0
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0
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28
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September 21, 2023
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Topology error
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1
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30
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September 21, 2023
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Why Fatal error: Unexpected cudaStreamQuery failure happend in gromacs2019?
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2
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33
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September 21, 2023
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Mdp guidelines
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1
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29
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September 21, 2023
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Effect of Ubuntu installation on SD card on the simulation speed
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1
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33
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September 21, 2023
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Pressure scaling more than 1%
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5
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1932
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September 21, 2023
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Problem running gromacs with GPU
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1
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37
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September 21, 2023
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Fatal error: Unexpected cudaStreamQuery failure: an illegal memory access was encountered
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3
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946
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September 21, 2023
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What can be the variation of lennard jones long range interactions between enzyme and a metal ion?
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0
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21
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September 20, 2023
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Box distortion in simulation of an ion channel with electric field
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13
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562
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September 20, 2023
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Anisotropic pressure setting for curvature membrane
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0
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28
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September 20, 2023
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