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AWH Sampling across periodic boundaries
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3
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25
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September 28, 2022
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Introducing New atom to the Gromacs forcefield
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2
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40
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September 28, 2022
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Preventing Gromacs from wrapping the trajectory
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4
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25
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September 28, 2022
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Cannot build Gromacs due to Cmake complaining about the compiler
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3
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22
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September 27, 2022
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Error with gmx mdrun -deffnm md_0_10 -v -nb gpu
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6
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67
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September 27, 2022
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How to know which frame of trajectory has a minimum energy in free energy landscape analysis?
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1
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93
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September 27, 2022
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Single-stranded dna rmsd analysis
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4
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89
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September 27, 2022
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How to orient the protein for lipid bilayer simulation
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2
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25
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September 27, 2022
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Influence of the atom position restraints on the calculation of the surface stress/tension
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1
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30
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September 26, 2022
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File input/output error: Cannot rename checkpoint file; maybe you are out of disk space?
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5
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57
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September 26, 2022
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Umbrella Sampling for Protein-Ligand Complexes
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2
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155
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May 28, 2021
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Error in grompp gmx_mpi
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4
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45
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September 25, 2022
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Simulation unstable with external potential
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4
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32
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September 24, 2022
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Recenter coordinate from extended simulation
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4
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30
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September 24, 2022
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Adding SEP and TPO to CHARMM36 ff
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7
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279
|
September 23, 2022
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Umbrella Sampling Error in the Transformation Reaction Coordinate
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2
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31
|
September 23, 2022
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RDF confusing
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0
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35
|
September 23, 2022
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Performace lost due to PME ranks
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0
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21
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September 23, 2022
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Dump Trajectories with Wrapped Boundaries
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1
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22
|
September 23, 2022
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Normalized electric fields
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1
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21
|
September 23, 2022
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Gmx genion -s ions.tpr -o solv_ions.gro -p topol.top -pname NA -nname CL -neutral
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1
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27
|
September 23, 2022
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New version of Gromacs
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2
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44
|
September 23, 2022
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Header files are not copied when install GROMACS 2022
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0
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20
|
September 23, 2022
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A question about gen_seed in the log file
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6
|
192
|
September 22, 2022
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Area per lipid in DPPC1024
|
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0
|
17
|
September 22, 2022
|
|
Compilation error : Target "cmTC_3823b" requires the language dialect "CXX17"
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5
|
1777
|
September 22, 2022
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Initialization of surface with specific set roughness
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0
|
16
|
September 22, 2022
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Misuse of the word triclinic
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7
|
41
|
September 22, 2022
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Units of Lennard Jones Potential Parameters
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2
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55
|
September 22, 2022
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Problem in generating topology file of a polymer
|
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9
|
75
|
September 21, 2022
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