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Problem with the installation and performance of gmx-clusterByFeatures
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1
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17
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September 15, 2020
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Whats the appropriate pdb file for analysing cavities,channels,..with mole2 package?
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1
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6
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September 15, 2020
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Pdb file for the lowest energy conformation of protein
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6
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41
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September 15, 2020
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Why is the order of amino acids in the output diagram of "gmx mdmat" messed up?
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2
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11
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September 15, 2020
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Missing N-term patch dihedral CHARMM36m port
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2
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8
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September 15, 2020
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QM/MM tutorial for binding free energies
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1
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13
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September 15, 2020
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How do I visualize a group made with gmx make_ndx?
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3
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26
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September 15, 2020
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Intramolecular electrostatics
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4
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25
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September 14, 2020
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GPU error during installation of gromacs2019.6
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2
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21
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September 14, 2020
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Problem with orientational restraints
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6
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46
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September 14, 2020
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WARNING: WARNING: Residue 27 named ALA Inquiry
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3
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11
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September 14, 2020
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Trjconv for removing pbc: -s gro does not yield expected result
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3
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18
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September 14, 2020
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How to determine compressibility?
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2
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14
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September 14, 2020
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Which pressure coupling method to choose?
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7
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48
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September 14, 2020
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How Solvate a protein in Tri fluro ethanol?
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2
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16
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September 13, 2020
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In gmx mdmat command, how can I place the general axis of my molecule along one of the x, y, or z ax
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2
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20
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September 9, 2020
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Why am I getting LINCS warnings from energy minimization?
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3
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26
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September 12, 2020
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How to insert molecules without overlap?
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7
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33
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September 12, 2020
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How to do the correction for calculating the absolute binding free energy for a ligand with charge?
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1
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16
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September 12, 2020
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User-defined potential for position restraints
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5
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23
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September 11, 2020
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Viscosity of anisotropic system
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1
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38
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June 9, 2020
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Shear Viscosity
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5
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50
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September 11, 2020
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LINCS warnings
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6
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37
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September 11, 2020
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Make error : Liking CXX
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3
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16
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September 10, 2020
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Polymer topology
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3
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40
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September 10, 2020
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Error in MD run for Energy Minimization step
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6
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40
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September 10, 2020
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Free energy calculation of two molecules in water
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28
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140
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September 10, 2020
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Finding either moles [mol] or mass [kg] of protein dissolved in water
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3
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18
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September 10, 2020
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Gmx xpm2ps
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3
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24
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September 10, 2020
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Query regarding gmx error for sld.prm file while generating ions.tpr file
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5
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21
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September 9, 2020
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