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Constraining two water droplets at constant distance between their COMs using pull code
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33
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919
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May 9, 2023
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Pull_f and Pull_X graphs showing sharp peaks
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2
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300
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April 18, 2023
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How to apply pulling force in one helix of a single chain globular protein to perform SMD?
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10
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1127
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March 24, 2023
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Pull code error in Gromacs version 2019.6
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6
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2599
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November 22, 2022
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Negative force from pulling simulation
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5
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902
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November 16, 2022
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Steered MD simulation of ligand through membrane protein
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2
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865
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February 25, 2022
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How to get the velocity of the COM of a pulling group?
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6
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934
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February 22, 2022
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How to pull a molecule across the bilayer?
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5
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1463
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January 25, 2022
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Steered MD pulling rate does not result in desired final pulling distance
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2
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713
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November 22, 2021
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Pulling a ligand out of the active site of a protein for PMF analysis
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3
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578
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October 22, 2021
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How would you avoid the case that an SMD stops if d > L/2?
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5
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493
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September 18, 2021
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When pulling a group of a simulation system, how does each atom feel the pulling force?
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2
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1432
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September 15, 2021
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Constant-force vs constant velocity
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0
|
498
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September 12, 2021
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How to pull a molecule across a bilayer with fixed boundaries?
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14
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1517
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June 25, 2021
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Pull Code operation
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0
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392
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April 30, 2021
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PMF for angle rotations
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1
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670
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March 29, 2021
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How does Pull code apply potential?
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1
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419
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March 25, 2021
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