Adding SEP parameter to AMBER99SB.ff

User discussions

jalemkul April 22, 2021, 12:47pm 5

I posted the solution here and on your thread.

Add TPO, SEP to Amber99SB-ildn (ffbonded)

Topic		Replies	Views	Activity
Add TPO, SEP to Amber99SB-ildn (ffbonded) User discussions forcefield	2	945	August 24, 2021
Adding Phosphate Group to Serine Residue for AMBER to Simulate on GROMACS User discussions	0	717	October 17, 2021
Adding SEP and TPO to CHARMM36 ff User discussions	8	1711	September 21, 2024
Dangling bond error with capped phosphorylated amino acid User discussions	2	312	November 8, 2023
Simulating phosphoserine / phosphothreonine User discussions	3	468	September 12, 2022