Errors with REMD simulation

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1

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I am trying to run a REMD mdrun simulation on a SLURM queueing platform, but and i get the following error message.
gmx_mpi: /lib64/libstdc++.so.6: version GLIBCXX_3.4.21' not found (required by gmx_mpi) gmx_mpi: /lib64/libstdc++.so.6: version CXXABI_1.3.9’ not found (required by gmx_mpi)

gmx_mpi: /lib64/libstdc++.so.6: version CXXABI_1.3.8' not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5) gmx_mpi: /lib64/libstdc++.so.6: version CXXABI_1.3.11’ not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5)
gmx_mpi: /lib64/libstdc++.so.6: version GLIBCXX_3.4.22' not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5) gmx_mpi: /lib64/libstdc++.so.6: version GLIBCXX_3.4.20’ not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5)
gmx_mpi: /lib64/libstdc++.so.6: version GLIBCXX_3.4.21' not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5) gmx_mpi: /lib64/libstdc++.so.6: version CXXABI_1.3.9’ not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5)
gmx_mpi: /lib64/libstdc++.so.6: version `CXXABI_1.3.8’ not found (required by /home/apps/iiser/apps_intel_2020/gromacs-2020.4-install/lib64/libgromacs_mpi.so.5)

Could someone please help me out?

2

Hi,
it looks like some libraries can not be found or are missing. I saw that use a queue system, thus I suggest to ask to the admin of the cluster for help.
\Alessandra

3

Thanks a lot for your reply Alevilla. I shall do the same.