GROMACS version: 2021.4-Ubuntu-2021.4-2
GROMACS modification: No
Hi everybody,
another problem I have right now is that if my molecule gets to big (starts between 56 and 62 atoms per molecule), the energy minimization works fine, but by starting the mdrun using: “gmx mdrun -v -deffnm pr &”, I get a system error which is called “Sorry, the application gmx has stopped unexpectedly.” with the Title: GMX crashed with SIGSEGV in start_thread().
Segv reason is: reading unknown VMA
I am using an i5-12500 processor. Already tried to set nsteps from 50000 to 20000 to 5000, but this did not work. Also I am expanding my start cell and tried to minimize the extension. Yet, nothing solved the problem and it always crashes.
Yet, I found nothing that solved my error, so any help and tips are welcome!
Kind regards,
Konsti
PS: I am sorry if the solution is already somewhere in this forum, then I either did not find it or did not understand it properly so I could not use it.