GROMACS version:2022-beta1
GROMACS modification: No
Hi Everyone,
I am trying to run a Martini system built with Martini 22 forcefield for my protein and while performing the minimization, I am getting an fatal error.
Fatal error:
There are inconsistent shifts over periodic boundaries in a molecule type
consisting of 272 atoms. The longest distance involved in such interactions is
8.998 nm which is close to half the box length. Eithe you have excessively
large distances between atoms in bonded interactions or your system is
exploding.
I have given the correct periodic boundary condition for the system. But still, ended up with this error. Could anyone help me out with this ?
With regards,
Kesavan