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About the Third party tools and files category
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0
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930
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September 15, 2020
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Supporting CIF Format in GROMACS
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3
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1398
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November 13, 2025
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x2top for MINFF
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0
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37
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October 2, 2025
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gmx_ffconv: A Fast, User-Friendly Semi-Automated All-Atom Force Field Converter for GROMACS
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0
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93
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September 21, 2025
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gmx_clusterByFeatures - Features-based conformational clustering from MD Simulations
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0
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54
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July 7, 2025
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g_mmpbsa update for latest GROMACS
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0
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127
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June 4, 2025
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gorder: Comprehensive tool for calculating lipid order parameters from molecular simulations
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0
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52
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May 12, 2025
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Online server for MINFF and CLAYFF topologies
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0
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85
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April 10, 2025
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MINFF: a new family of forcefields for minerals
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0
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137
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December 5, 2024
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dRama: Differential Ramachandran Plot as a Tool to Analyze Subtle Changes in Protein Structure
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0
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195
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November 26, 2024
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Newest CHARMM36 port for GROMACS
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38
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22470
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September 5, 2024
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amber14sb_OL15.ff correction in Dihedrals
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2
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1140
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April 25, 2024
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GenTopo: A python tool kit for generating gromacs topology template
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1
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2266
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April 4, 2024
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PolySMart: a general coarse-grained molecular dynamics polymerization scheme
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0
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427
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February 21, 2024
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Visual Interactive Analysis of Molecular Dynamics (VIAMD)
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0
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894
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December 5, 2023
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Atom: a MATLAB library for creating discrete or periodic systems and topologies (for Gromacs)
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1
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730
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November 12, 2023
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polyGraft: A Program for Molecular Structure and Topology Generation of Polymer-Grafted Hybrid Nanos
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0
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360
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August 27, 2023
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ComplexMixtures.jl: Investigating the structure of solutions of complex-shaped molecules
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1
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503
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June 22, 2023
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Adding an extra input for electric field in mdp files
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0
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864
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May 29, 2023
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Announcing gmxapi 0.2 Python package
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7
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1062
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March 10, 2023
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FixBox: a tool to fix broken systems due to PBCs
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0
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617
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December 30, 2022
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Making densities (multimers/aggregates/objects) whole over PBC
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0
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701
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February 9, 2022
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GROMACS implementation of the AMBER99SB-UCB force field
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0
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861
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July 9, 2021
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GMXRC for the Fish shell
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0
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849
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September 27, 2021
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gmx_MMPBSA: a new tool aiming to perform end-state free energy calculations with GROMACS files
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1
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2042
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September 4, 2025
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QM/MM with xtb and Turbomole
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0
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1298
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May 27, 2021
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Software for running NMR refinement in GROMACS
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0
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1234
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March 29, 2021
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GADDLE Maps, mapping Coarse Grained systems to Fully Atomistic
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0
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864
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March 8, 2021
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Gromologist: a tool for Gromacs topology manipulation
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0
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1472
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December 31, 2020
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sol_remover
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0
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902
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October 5, 2020
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