GROMACS modification: Yes/No
I’m trying to generate a .gro and .top files from the .pdb structure of polyglycinealanine, using the Amber99 FF. When trying to do so, however, the following error appears:
Atom H1 in residue ACE 1 was not found in rtp entry ACE with 6 atoms
while sorting atoms.
H1 atom is included in the aminoacids.rtp file witht the correct name, and -ignh option doesn’t work either.
What should I do?