GROMACS version:2019-4
GROMACS modification: No
We want to analyze how lipids are ordered close to moving molecule in membrane during simulation.
How can we select lipids around 1 nm from a molecule from whole trajectory ? We would like to examine order parameters in various frames. We tried with a command "gmx select -select 'resname “LIPID” and within 1 of resname “LIG” ’ but it was not succesfull.
BR,
Maija