Error on trjconv

User discussions
1

GROMACS version: 2020.1
GROMACS modification: Yes/No

For fixing PBC problem, I used following command:

gmx trjconv -s md.tpr -f md.xtc -o new.gro -pbc mol - center

But I encountered with:

rogram: gmx trjconv, version 2020.1-Ubuntu-2020.1-1
Source file: src/gromacs/utility/futil.cpp (line 442)

File input/output error:
new.gro

For more information and tips for troubleshooting, please check the GROMACS
website at Common Errors — GROMACS webpage https://www.gromacs.org documentation

How to solve that?

2

The error means either you do not have permission to write files in the working directory or you are out of disk space.

3

Thank you!