I have just got the SMD done. And now I’m on my way analyzing Pulling Work (W) and binding free energy (delta G). The Gromacs Tutorials doesn’t show to do it. I gave it a try searching on Google how to get these 2 things done. But I still cannot find out any infomation of how to do it.
Could you all possibly let me know how, or do you have any documents teaching about this?
Thank you for your help.