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Calculating the free energy of binding using AWH approach
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8
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135
|
May 28, 2026
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Mdrun with awh for a dimeric protein
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0
|
39
|
April 29, 2026
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Using AWH for bilayer permeability
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18
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1373
|
April 22, 2026
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Martini AWH: Drug–polymer complex does not permeate membrane with position restraints; complex break
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0
|
30
|
April 9, 2026
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Awh - gromacs 2026.1
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7
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96
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March 27, 2026
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AWH with direction-relative | Assertion failed: Condition: weightSum > 0
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4
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60
|
March 25, 2026
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Accelerated Weight Histogram Method: from Principles to Practice
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0
|
107
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February 10, 2026
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Questions regarding AWH and comparison to MBAR
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3
|
109
|
February 10, 2026
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Awh friction tensor and friction metric relation with two reaction coordinates
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5
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103
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December 12, 2025
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Updating diffusion constant midway through the simulation run
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2
|
58
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December 5, 2025
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AWH multiple .xvg files analysis
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1
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61
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June 5, 2025
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AWH Error During Ligand-Membrane Pulling in Z-direction
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|
1
|
88
|
April 4, 2025
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Estimating diffusion constant for AWH simulation
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1
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130
|
January 28, 2025
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Analysis of AWH simulations
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2
|
220
|
November 18, 2024
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Advice needed: AWH and Pull code debugging
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9
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355
|
September 24, 2024
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AWH Sampling
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2
|
153
|
September 16, 2024
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Combined analysis of independent AWH runs
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6
|
164
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September 11, 2024
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Multi-walker awh simulation using one gpu
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2
|
232
|
August 27, 2024
|
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AWH reaction coordinate
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2
|
692
|
February 14, 2024
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AWH very large free energy barriers
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13
|
484
|
December 18, 2023
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How to set awh1-dim1-diffusion and awh1-error-init properly
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4
|
414
|
December 12, 2023
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PMF of a small molecule across a slab that has vapor-liquid interface
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|
1
|
425
|
August 21, 2023
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AWH assertion failed error
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3
|
421
|
July 25, 2023
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AWH and PMF convergence
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|
10
|
733
|
March 10, 2023
|
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Transformation pull co-ordinate dihedral maths is odd
|
|
7
|
604
|
February 1, 2023
|
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Memory issue with 2D AWH and angle
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|
12
|
539
|
January 10, 2023
|
|
AWH Sampling across periodic boundaries
|
|
3
|
453
|
September 28, 2022
|
|
Convergence for awh
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|
3
|
737
|
June 8, 2022
|
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Standard error on AWH free energy estimate?
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|
6
|
641
|
June 7, 2022
|
|
AWH FEP mdp options
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|
5
|
1420
|
September 3, 2021
|