|
How can I set other type of LJ interaction in Gromacs?
|
|
0
|
107
|
May 10, 2024
|
|
What is the specifications of rigid frame work of Zeolite?
|
|
0
|
92
|
May 9, 2024
|
|
How can I calculate the number of atoms and the size of the simulation box for the MD simulation?
|
|
9
|
910
|
May 9, 2024
|
|
Applying external force to group of atoms
|
|
12
|
1072
|
May 9, 2024
|
|
Constraint in mdp
|
|
3
|
332
|
May 9, 2024
|
|
Gmx energy LJ (SR) Calculation
|
|
0
|
254
|
May 8, 2024
|
|
RNA Ligand Simulation Problem
|
|
1
|
102
|
May 8, 2024
|
|
Tutorial of sample umbrella
|
|
8
|
560
|
May 8, 2024
|
|
Relative Binding Free Energy Calculation of Protein-Ligand Complex
|
|
2
|
269
|
May 8, 2024
|
|
Pressurized fluid flow
|
|
13
|
928
|
May 8, 2024
|
|
Bulding an itp and gro file
|
|
10
|
480
|
May 8, 2024
|
|
Vacuum Simulations
|
|
9
|
2799
|
May 8, 2024
|
|
Capping residue ACE not recognised from the rtp file
|
|
15
|
4469
|
May 8, 2024
|
|
Water diffusion after -pbc nojump
|
|
2
|
143
|
May 8, 2024
|
|
How to decide on constant or restraint
|
|
1
|
94
|
May 7, 2024
|
|
MdrunTestsTwoRanks failed
|
|
3
|
775
|
May 7, 2024
|
|
GROMACS 2023.5 patch release
|
|
0
|
81
|
May 7, 2024
|
|
Integration of density profiles
|
|
0
|
102
|
May 7, 2024
|
|
GROMACS 2023.5 patch release available
|
|
0
|
101
|
May 7, 2024
|
|
Fix the edge of the membrane
|
|
4
|
109
|
May 7, 2024
|
|
GROMACS Developer: Researcher in High Performance Computing (HPC)
|
|
0
|
149
|
May 7, 2024
|
|
Portability query
|
|
6
|
73
|
May 7, 2024
|
|
High fluctuation in rmsd of apoprotein
|
|
2
|
206
|
May 6, 2024
|
|
Residue 1 named ALA of a molecule in the input file was mapped to an entry in the topology database
|
|
0
|
114
|
May 6, 2024
|
|
Problem during the lipid bilayer simulation minimisation step
|
|
1
|
86
|
May 6, 2024
|
|
Simulation of double walled CNT in Gromacs with CHARMM force filed
|
|
0
|
181
|
May 6, 2024
|
|
Can replicates of energy minimization have same potential energy
|
|
1
|
53
|
May 6, 2024
|
|
GROMACS on Colab
|
|
0
|
614
|
December 6, 2023
|
|
MgO nanoparticle deformed in production stage
|
|
2
|
109
|
May 6, 2024
|
|
COM pulling of large groups:
|
|
1
|
312
|
May 6, 2024
|