GROMACS modification: No
How do I incorporate
-ignh to allow the system to add the correct hydrogens for me? any info will be helpful!
I got the following error message:
Missing hydrogen atoms; the error message may be suggesting that an entry in the .hdb file is missing. More likely, the nomenclature of your hydrogen atoms simply does not match what is expected by the .rtp entry. In this case, use
-ignh to allow pdb2gmx to add the correct hydrogens for you, or re-name the problematic atoms.