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Standard deviation analysis for RMSF plot
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0
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23
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January 26, 2025
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The 'make install' step does not install libgromacs_mpi.a
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5
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40
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January 25, 2025
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Parametrization of PYROGLUTAMIC ACID
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4
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81
|
January 25, 2025
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Protein-Ligand Interaction Energy
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0
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16
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January 25, 2025
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RMSF analyze command
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1
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19
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January 24, 2025
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Zero OPLS Lennard-Jones parameters for H atoms and overlapping atoms
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5
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870
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January 24, 2025
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GROMACS 2024.5 patch release
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0
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35
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January 24, 2025
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GROMACS 2024.5 patch release available
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0
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247
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January 24, 2025
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Failed test during make check
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2
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51
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January 24, 2025
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Protein ligand complex for aggregation study
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0
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11
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January 24, 2025
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Getting very high RMSD value after 75ns
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4
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73
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January 24, 2025
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Mdrun/plumed with -update gpu in gmx 2025?
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1
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68
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January 24, 2025
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Advice for setting up attraction potential measurement between 2 collagen triple helices
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0
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6
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January 24, 2025
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Protonation States in the OPLS-AA Forcefield
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0
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17
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January 24, 2025
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Expanded ensemble: Performance impact of perturbing more atoms
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4
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35
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January 23, 2025
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Warning: atom name in .top and .gro does not match
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2
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114
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January 23, 2025
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How to perform md simulation on a protein structure which have a ca+ ions
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0
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37
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January 23, 2025
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January 22nd, biweekly GROMACS developer meeting - morning edition
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4
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66
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January 23, 2025
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Topology of an ACE-linked cyclic peptide with a free C-ter
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0
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35
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January 23, 2025
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The first step of energy minimization cannot be carried out
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0
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11
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January 23, 2025
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NPT steps warnings
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0
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67
|
January 22, 2025
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Parametrization of DNA Backbone with Alkyl Chain Using CHARM and Non-Integer Charge Issue
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0
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9
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January 22, 2025
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DNA Backbone Parametrization and rtp File
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1
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46
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January 20, 2025
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Gmx mdrun on gpu problem
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0
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26
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January 22, 2025
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About gmx_MMPBSA_test. Why it is not showing gmx_MMPBSA_test command
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1
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161
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January 22, 2025
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NPT Step Issue with Protein 1QS4 (4 Waters and Mg²⁺ in Active Site)
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4
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29
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January 22, 2025
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Cannot find position restraint file restraint.gro in CHARMM-GUI input files fro GROMACS
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1
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34
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January 22, 2025
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Proper Procedure to generate GROOMAC input files from NMR structure
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2
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26
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January 22, 2025
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Swissparm prm file
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11
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1087
|
January 22, 2025
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No default angle types, no default proper Dih. types
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2
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22
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January 22, 2025
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