|
Concatenation of two xtc files
|
|
5
|
2598
|
August 25, 2022
|
|
Secondary neutral amine becomes planar due to wrong virtual site construction
|
|
3
|
259
|
August 25, 2022
|
|
DSSP run but show this error
|
|
1
|
412
|
August 25, 2022
|
|
What does "COM-pull-energy" mean in the pulling process
|
|
8
|
746
|
August 25, 2022
|
|
Error when extending a box in z dimesnion
|
|
0
|
214
|
August 24, 2022
|
|
Installing error of the last version gromacs -2022.2
|
|
0
|
350
|
August 24, 2022
|
|
Command to calculate energy of newly defined groups from an pre calculated xtc file
|
|
1
|
579
|
August 24, 2022
|
|
Appropriate .mdp settings for Gromos54a7
|
|
0
|
570
|
August 24, 2022
|
|
Umbrella sampling for pulling one atom out of a big crystalline structure
|
|
3
|
439
|
August 23, 2022
|
|
Regression tests for GROMACS with PLUMED
|
|
2
|
637
|
August 23, 2022
|
|
NPT production run, multiple independent simulations, and end-state free energy calculations
|
|
0
|
516
|
August 22, 2022
|
|
Extending simulations
|
|
6
|
3400
|
August 22, 2022
|
|
Make check failure
|
|
0
|
290
|
August 21, 2022
|
|
What are function types for disulphide bonds in gromos54a7.ff?
|
|
0
|
198
|
August 20, 2022
|
|
Do we need Pressure coupling while pulling during umbrella sampling
|
|
2
|
362
|
August 20, 2022
|
|
Three point bending test on a 2D nanomaterial with SMD in gromacs
|
|
2
|
285
|
August 19, 2022
|
|
Linear chain vs blob
|
|
2
|
220
|
August 19, 2022
|
|
Warning druing energy minimization
|
|
2
|
630
|
August 19, 2022
|
|
"gmx pdb2gmx -ss yes" does not change gro and top/itp files
|
|
4
|
555
|
August 19, 2022
|
|
New residue top
|
|
25
|
2235
|
August 18, 2022
|
|
-mol option in gromacs analysis
|
|
3
|
435
|
August 18, 2022
|
|
Abbreviation for GROMACS
|
|
3
|
390
|
August 18, 2022
|
|
Gromacs with hipSYCL throwing a symbol lookup error at runtime
|
|
4
|
981
|
August 17, 2022
|
|
A series of commands in a script
|
|
1
|
818
|
August 17, 2022
|
|
Gmx WHAM warning, no data points read from file pullf.xvg
|
|
1
|
1241
|
August 16, 2022
|
|
Extracting energies of different groups
|
|
2
|
210
|
August 16, 2022
|
|
Error: No default Proper Dih. types
|
|
1
|
379
|
August 16, 2022
|
|
GROMACS quotes appearing in data
|
|
1
|
856
|
August 16, 2022
|
|
How to determine compressibility?
|
|
4
|
2485
|
August 16, 2022
|
|
Minimization With Constraint of 0.5kcal/mol.A^2
|
|
0
|
193
|
August 15, 2022
|