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Using pbc or minimum image convention for gmx distance
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|
0
|
600
|
February 25, 2022
|
|
Steered MD simulation of ligand through membrane protein
|
|
2
|
858
|
February 25, 2022
|
|
Why does not dihedral angle parameters generate for new molecules?
|
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8
|
1514
|
February 24, 2022
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Regression Test "make check" Compilation Failure
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4
|
1090
|
February 23, 2022
|
|
Calculate speed at which two groups move towards each other
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4
|
460
|
February 23, 2022
|
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Memory -error
|
|
1
|
344
|
February 23, 2022
|
|
Simulation of Giant Plasma Membrane Vesicles
|
|
0
|
369
|
February 22, 2022
|
|
GROMACS 2022 official release
|
|
2
|
1391
|
April 25, 2022
|
|
How to get the velocity of the COM of a pulling group?
|
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6
|
929
|
February 22, 2022
|
|
Concatenate two trajectories
|
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0
|
415
|
February 22, 2022
|
|
About the usage of gmx hbond
|
|
0
|
350
|
February 22, 2022
|
|
Regarding the use of WCA and Attractive inteactions simultaneously
|
|
0
|
426
|
February 21, 2022
|
|
How to solve the error of no default angle types and ryckaert-Bell. types
|
|
0
|
591
|
February 21, 2022
|
|
Insert-molecules at exact predefined positions;how to use positions.dat and -ci option/configuration
|
|
5
|
2305
|
February 21, 2022
|
|
LJ parameters
|
|
1
|
559
|
February 21, 2022
|
|
Selections for gmx distance/ gmx mindist / gmx pairdist
|
|
1
|
2976
|
February 21, 2022
|
|
Logic in make_ndx
|
|
2
|
552
|
February 21, 2022
|
|
Repulsive potential between virtual sites
|
|
1
|
243
|
February 21, 2022
|
|
Gmx do_dssp not running
|
|
2
|
991
|
February 21, 2022
|
|
Dreiding force field
|
|
0
|
625
|
February 20, 2022
|
|
Calculating the concentration of ions
|
|
6
|
907
|
February 20, 2022
|
|
Covalent bond breaks after energy minimization
|
|
4
|
1335
|
February 20, 2022
|
|
Problem in running MMPBSA on Gromacs 2020.3
|
|
4
|
1016
|
February 20, 2022
|
|
Fatal error: Invalid dihedral type 0
|
|
8
|
1229
|
February 18, 2022
|
|
About the cross correlation (DCCM)
|
|
0
|
781
|
February 18, 2022
|
|
Mdrun using trajectory file
|
|
3
|
554
|
February 17, 2022
|
|
Multiple Walker simulations without MPI
|
|
0
|
933
|
February 17, 2022
|
|
Free energy surface
|
|
3
|
1265
|
February 16, 2022
|
|
Restarting calculations
|
|
2
|
410
|
February 16, 2022
|
|
How to fix center of mass of group of molecules?
|
|
0
|
457
|
February 16, 2022
|