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Error running Periodic graphene with mpi threads
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0
|
9
|
May 29, 2025
|
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PBC artifact issue
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0
|
30
|
April 12, 2025
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Issue with correcting PBC for DNA Separation in GROMACS
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7
|
58
|
January 15, 2025
|
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Handling of PBCs with multiple peptides
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2
|
23
|
January 7, 2025
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Drift of the system in the periodic box during simulations
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2
|
46
|
December 17, 2024
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System getting out of box upon simulation
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2
|
131
|
October 29, 2024
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Jumping residue after PBC removal
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13
|
381
|
August 26, 2024
|
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Fix two separate DNA strands after simulation using -pbc cluster
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0
|
19
|
July 22, 2024
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Manual Error Regarding Rhombic Dodecahedral Cell?
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1
|
113
|
April 30, 2024
|
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Trajectory slicing changes 3D coordinates
|
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1
|
156
|
March 7, 2024
|
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Is PBC correction necessary for some particular type of analysis?
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2
|
1015
|
May 30, 2023
|
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Unification of box shapes in molecular simulations
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2
|
507
|
March 16, 2023
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PBC correction doesn't remove all PBCs
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0
|
619
|
November 2, 2022
|
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Remove PBC effects on membrane+protein+ligand
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4
|
589
|
October 20, 2022
|
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Making densities (multimers/aggregates/objects) whole over PBC
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0
|
692
|
February 9, 2022
|
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Why does molecules in MD trajectory go out of the pbc box in VMD / pymol?
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1
|
990
|
January 21, 2022
|
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Pbc correction
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|
1
|
441
|
November 12, 2021
|
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Remove PBC
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|
1
|
672
|
September 27, 2021
|
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Starting simulation from another trajectory using -t grompp option - How are PBC treated?
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|
3
|
723
|
March 30, 2021
|